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BaseInfo

ncRNA ID novel_zma_miR9340
Species Zea mays
Class miRNA
Genome position Chr1:185832911-185832974 [-]
Reference genome RefGen_v4
Source SRR4237223
Length 24
Mature sequence(if miRNA) 41 - ACCAGACAAUGUGAGACUAUUCCC - 64
Stem-loop(if miRNA) --                             U
  ACCAGACAAUGUGAGACUAUUCCCAACAA U
  |||||||||||||||||||||||||||||
  UGGUCUGUUACACUCUGAUAAGGGUUGUU A
AG                             A
Stem-loop sequence ACCAGACAAUGUGAGACUAUUCCCAACAAUUAAUUGUUGGGAAUAGUCUCACAUUGUCUGGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ109122.1
ncRNA:24   CCCUUAUCAGAGUGUAACAGACCA   1
  ||||||||||*|||||||||||||
targets:116   GGGAAUAGUCCCACAUUGUCUGGU   139

1.0 TSA: Zea mays contig44781, mRNA sequence NA coding protein psRNATarget
XM_008664926.2
ncRNA:24   CCCUUAUCAGAGUGUAACAGACCA   1
  ||||||||||*||||||||*||||
targets:227   GGGAAUAGUCCCACAUUGUGUGGU   250

2.5 PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 6 (LOC103641588), mRNA NA coding protein psRNATarget
XM_008664926.2
ncRNA:24   CCCUUAUCAGAGUGUAACAGACCA   1
  ||||||||||*||||||||*||||
targets:529   GGGAAUAGUCCCACAUUGUGUGGU   552

2.5 PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 6 (LOC103641588), mRNA NA coding protein psRNATarget