ncRNA ID | novel_zma_miR9332 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:75511928-75512143 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237223 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACCGGCUCACCAUCAUCUGGC - 21 |
Stem-loop(if miRNA) |
--    C    U              A                         A               G   G                    G  G  G       U   CAGA GAUG UGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUU AAAGCUGCCCCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G   |||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| || || |||||||   GUCU CUAC ACUCGGCCACAUGA ACAGGCCUGCACACCAGUGUUUUAA UUUCGGCGGGGCCGA GUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A CG    A    C              G                         A               A   G                    A  G  G       U |
Stem-loop sequence | CAGACGAUGUUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCACAAAAUUAAAAGCUGCCCCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCGGGGCGGCUUUAAAUUUUGUGACCACACGUCCGGACAGAGUACACCGGCUCACCAUCAUCUGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538582.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538581.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |