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BaseInfo

ncRNA ID	ath-miRf10101-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CUACUCGGCCAUGGGGUCGA - NA
Stem-loop(if miRNA)	A  G          -    GUGAA     -GA   CUU          A AUACUUGACC CA GGUCGAGUGG UGGU     GUGAU   GGC   CUACUCGACC G |||||||||| || |||||||||| ||||     |||||   |||   |||||||||| UGUGAGCUGG GU CCGGCUCAUC ACCG     UGCUG   UUG   GGUGAGCUGG G           G  A          U    --AAG     AAA   UUU          G
Stem-loop sequence	AUACUUGACCACAGGGUCGAGUGGUGGUGUGAAGUGAUGAGGCCUUCUACUCGACCAGGGGGUCGAGUGGUUUGUUAAAGUCGUGAAGCCAUCUACUCGGCCAUGGGGUCGAGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY231407.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   ||||||||||||=||||||* targets:539   UCGACCCCAUGGUCGAGUAC   558 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BX827733.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:12   UCGACGCCAUGGCCGAGAAG   31 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZB11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX826428.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:62   UCGACGCCAUGGCCGAGAAG   81 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK221731.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:75   UCGACGCCAUGGCCGAGAAG   94 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL19-55-E16	NA	coding protein	psRNATarget
AY065105.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:76   UCGACGCCAUGGCCGAGAAG   95 Target Full Sequence	2.5	Arabidopsis thaliana unknown protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001341099.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:76   UCGACGCCAUGGCCGAGAAG   95 Target Full Sequence	2.5	Arabidopsis thaliana Heavy metal transport/detoxification superfamily protein mRNA	Heavy metal transport/detoxification superfamily protein(AT4G16380)	coding protein	psRNATarget
NM_001341101.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:227   UCGACGCCAUGGCCGAGAAG   246 Target Full Sequence	2.5	Arabidopsis thaliana Heavy metal transport/detoxification superfamily protein mRNA	Heavy metal transport/detoxification superfamily protein(AT4G16380)	coding protein	psRNATarget
BX826953.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:65   UCGACGCCAUGGCCGAGAAG   84 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB7ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_202830.6	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:428   UCGACGCCAUGGCCGAGAAG   447 Target Full Sequence	2.5	Arabidopsis thaliana Heavy metal transport/detoxification superfamily protein mRNA	Heavy metal transport/detoxification superfamily protein(AT4G16380)	coding protein	psRNATarget
NM_001341100.1	ncRNA:20   AGCUGGGGUACCGGCUCAUC   1   |||||*|||||||||||*|| targets:320   UCGACGCCAUGGCCGAGAAG   339 Target Full Sequence	2.5	Arabidopsis thaliana Heavy metal transport/detoxification superfamily protein mRNA	Heavy metal transport/detoxification superfamily protein(AT4G16380)	coding protein	psRNATarget