ncRNA ID | novel_zma_miR9319 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:112903302-112903466 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237223 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGCCUCGGCCCUCCUGUAUGCGC - 24 |
Stem-loop(if miRNA) |
--                   G      C              CCC                 -UA   A  UA   CG   CU   GCGUACAGGAGGGCUGAGG CGUGCU GGGGUGUUAUUGCA   UGGGUGCAUUCAAUAUA   UAU UA  CGG  GCA  A   ||||||||||||||||||| |||||| ||||||||||||||   |||||||||||||||||   ||| ||  |||  |||   CGUAUGUCCUCCCGGCUCC GCACGA CCCCACAAUAACGU   ACCCACGUAAGUUAUAU   AUA GU  GUC  CGU  A CG                   -      A              -CC                 CUC   C  GG   CA   AA |
Stem-loop sequence | GCGUACAGGAGGGCUGAGGGCGUGCUCGGGGUGUUAUUGCACCCUGGGUGCAUUCAAUAUAUAUAUAUAUACGGCGGCACUAAAAUGCACCUGGGUGCAUACUCUAUAUUGAAUGCACCCACCUGCAAUAACACCCCAAGCACGCCUCGGCCCUCCUGUAUGCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU964855.1 |
|
2.5 | Zea mays clone 282116 mRNA sequence | NA | coding protein | psRNATarget |