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BaseInfo

ncRNA ID	novel_zma_miR9313
Species	Zea mays
Class	miRNA
Genome position	Chr8:131990132-131990235 [+]
Reference genome	RefGen_v4
Source	SRR4237223
Length	24
Mature sequence(if miRNA)	81 - AUUGUGGCACCUUAGGUAGGAAAC - 104
Stem-loop(if miRNA)	--  G          C       -C  GCCUAACUUUUCUGCCUAAGUUUAG   UU CUGCCUAAGG GCCACAA  GU                         U   || |||||||||| |||||||  ||                         U   AA GAUGGAUUCC CGGUGUU  AC                         C CA  G          A       AC  GGAUUCGAAUCAGCGAGCUUAACUC
Stem-loop sequence	UUGCUGCCUAAGGCGCCACAACGUGCCUAACUUUUCUGCCUAAGUUUAGUUCCUCAAUUCGAGCGACUAAGCUUAGGCACAUUGUGGCACCUUAGGUAGGAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547797.1	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   ||||||||||||||||||=||||| targets:2034   GUUUCCUACCUAAGGUGCUACAAU   2057 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100285478 (LOC100285478), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB163482.1	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   |||||||=|||||||*|||||||| targets:9   GUUUCCUGCCUAAGGCGCCACAAU   32 Target Full Sequence	2.5	Sequence 1146 from Patent EP2559767	NA	coding protein	psRNATarget
HI403021.1	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   |||||||=|||||||*|||||||| targets:9   GUUUCCUGCCUAAGGCGCCACAAU   32 Target Full Sequence	2.5	Sequence 1146 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235151.1	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   |||||||=|||||||*|||||||| targets:9   GUUUCCUGCCUAAGGCGCCACAAU   32 Target Full Sequence	2.5	Sequence 1146 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008673397.2	ncRNA:24   CAAAGGAUGGAUUCCACGGUGUUA   1   ||||||||*||||||*|||||||| targets:16   GUUUCCUAGCUAAGGCGCCACAAU   39 Target Full Sequence	2.5	PREDICTED: Zea mays adenylate isopentenyltransferase 5, chloroplastic (LOC103649047), mRNA	NA	coding protein	psRNATarget