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BaseInfo

ncRNA ID osa-miRf10528-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CCAGUCAGGGGCUCGUUGCUGG - NA
Stem-loop(if miRNA)    UU      C G            A -C    AC  U   U
UGG  UCCAGC G GGGCUCCUGAUU G  ACCG  UC AGC U
|||  |||||| | |||||||||||| |  ||||  || |||
AUC  GGGUCG U CUCGGGGACUGA C  UGGU  AG UCG C
   UU      U G            C UU    -C  -   G
Stem-loop sequence UGGUUUCCAGCCGGGGGCUCCUGAUUAGCACCGACUCUAGCUUCGGCUGACUGGUUUCCAGUCAGGGGCUCGUUGCUGGGUUCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015757568.1
ncRNA:22   GGUCGUUGCUCGGGGACUGACC   1
  |||||||||||||||*||||||
targets:2394   CCAGCAACGAGCCCCCGACUGG   2415

1.5 PREDICTED: Oryza sativa Japonica Group variant surface antigen E-like (LOC107278990), transcript variant X1, mRNA variant surface antigen E-like(LOC107278990) coding protein psRNATarget
XM_015783383.1
ncRNA:22   GGUCGUUGCUCGGGGACUGACC   1
  |||||||||||||||*||||||
targets:2643   CCAGCAACGAGCCCCCGACUGG   2664

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281025 (LOC107281025), transcript variant X2, mRNA uncharacterized LOC107281025(LOC107281025) coding protein psRNATarget
XM_015765344.1
ncRNA:22   GGUCGUUGCUCGGGGACUGACC   1
  |||||||||||||||*||||||
targets:3035   CCAGCAACGAGCCCCCGACUGG   3056

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279812 (LOC107279812), transcript variant X2, mRNA uncharacterized LOC107279812(LOC107279812) coding protein psRNATarget
XM_015765343.1
ncRNA:22   GGUCGUUGCUCGGGGACUGACC   1
  |||||||||||||||*||||||
targets:3065   CCAGCAACGAGCCCCCGACUGG   3086

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279812 (LOC107279812), transcript variant X1, mRNA uncharacterized LOC107279812(LOC107279812) coding protein psRNATarget
XM_015795853.1
ncRNA:22   GGUCGUUGCUCGGGGACUGACC   1
  |=|||||||||||||*||||||
targets:3649   CUAGCAACGAGCCCCCGACUGG   3670

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107282086 (LOC107282086), transcript variant X3, mRNA uncharacterized LOC107282086(LOC107282086) coding protein psRNATarget