Search result

BaseInfo

ncRNA ID	novel_zma_miR9295
Species	Zea mays
Class	miRNA
Genome position	Chr7:115588821-115588913 [+]
Reference genome	RefGen_v4
Source	SRR4237223
Length	24
Mature sequence(if miRNA)	70 - AAGGAACCGCCAGUAGAAAUAUGA - 93
Stem-loop(if miRNA)	--                                   C  C        GUAUUUCUACUGGCGGUUCCUUAAGAAAACCGCCA UA AAAUCA   ||||||||||||||||||||||||||||||||||| || |||||U   UAUAAAGAUGACCGCCAAGGAAUUCUUUUGGCGGU AU UUUAGG AG                                   C  C
Stem-loop sequence	GUAUUUCUACUGGCGGUUCCUUAAGAAAACCGCCACUACAAAUCAUGGAUUUCUACUGGCGGUUUUCUUAAGGAACCGCCAGUAGAAAUAUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI402984.1	ncRNA:24   AGUAUAAAGAUGACCGCCAAGGAA   1   ||||||||||||*||||||||||| targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	1.5	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:24   AGUAUAAAGAUGACCGCCAAGGAA   1   ||||||||||||*||||||||||| targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	1.5	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
JB163445.1	ncRNA:24   AGUAUAAAGAUGACCGCCAAGGAA   1   ||||||||||||*||||||||||| targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	1.5	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
EU944427.1	ncRNA:24   AGUAUAAAGAUGACCGCCAAGGAA   1   ||||-|||||||||||||||=||| targets:501   UCAU-UUUCUACUGGCGGUUUCUU   523 Target Full Sequence	1.5	Zea mays clone 218366 mRNA sequence	NA	coding protein	psRNATarget
HI403097.1	ncRNA:24   AGUA-UAAAGAUGACCGCCAAGGAA   1   **||-|||||||*|||||||||||| targets:5   AAAUGAUUUCUAGUGGCGGUUCCUU   29 Target Full Sequence	1.5	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:24   AGUA-UAAAGAUGACCGCCAAGGAA   1   **||-|||||||*|||||||||||| targets:5   AAAUGAUUUCUAGUGGCGGUUCCUU   29 Target Full Sequence	1.5	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget
JB163558.1	ncRNA:24   AGUA-UAAAGAUGACCGCCAAGGAA   1   **||-|||||||*|||||||||||| targets:5   AAAUGAUUUCUAGUGGCGGUUCCUU   29 Target Full Sequence	1.5	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget