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BaseInfo

ncRNA ID novel_zma_miR9293
Species Zea mays
Class miRNA
Genome position Chr7:3751129-3751198 [+]
Reference genome RefGen_v4
Source SRR4237223
Length 24
Mature sequence(if miRNA) 47 - AGUACCGUCGGUCCGGGAGUGGAC - 70
Stem-loop(if miRNA) --   G   G    --      -   UGA      AG
  UUA UCU UGGG  GAUGGU CUU   UCCUAG  G
  ||| ||| ||||  |||||| |||   ||||||  G
  GGU AGG GCCU  CUGCCA GAA   AGGAUC  C
CA   G   -    GG      U   -UG      GU
Stem-loop sequence UUAGUCUGUGGGGAUGGUCUUUGAUCCUAGAGGGCUGCUAGGAGUAAGUACCGUCGGUCCGGGAGUGGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940966.1
ncRNA:24   CAGGUGAGGGCCUGGCUGCCAUGA   1
  |||||*||||||||=|||||||||
targets:397   GUCCAAUCCCGGACUGACGGUACU   420

2.5 Zea mays clone 1223688 mRNA sequence NA coding protein psRNATarget
BT065994.1
ncRNA:24   CAGGUGAGGGCCUGGCUGCCAUGA   1
  |||||*||||||||||=|||||||
targets:2618   GUCCAAUCCCGGACCGGCGGUACU   2641

2.5 Zea mays full-length cDNA clone ZM_BFb0139E09 mRNA, complete cds NA coding protein psRNATarget