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BaseInfo

ncRNA ID osa-miRf10525-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCACAGGUGGGUCACCUGUG - NA
Stem-loop(if miRNA)              -G             U -  AC
CCGUCACAGGUGG  UCACCUGUGACGG C CG  G
|||||||||||||  ||||||||||||| | ||  U
GGCAGUGUCCAUU  AGUGGACACUGCC G GC  U
             GA             U A  GU
Stem-loop sequence CCGUCACAGGUGGGUCACCUGUGACGGUCCGACGUUUGCGAGUCCGUCACAGGUGAAGUUACCUGUGACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015779008.1
ncRNA:20   GUGUCC-ACUGGGUGGACACU   1
  ||||||-||||||||||||||
targets:1369   CACAGGGUGACCCACCUGUGA   1389

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X3, mRNA uncharacterized LOC107280566(LOC107280566) coding protein psRNATarget
XM_015779007.1
ncRNA:20   GUGUCC-ACUGGGUGGACACU   1
  ||||||-||||||||||||||
targets:3239   CACAGGGUGACCCACCUGUGA   3259

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X2, mRNA uncharacterized LOC107280566(LOC107280566) coding protein psRNATarget
XM_015779006.1
ncRNA:20   GUGUCC-ACUGGGUGGACACU   1
  ||||||-||||||||||||||
targets:3330   CACAGGGUGACCCACCUGUGA   3350

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X1, mRNA uncharacterized LOC107280566(LOC107280566) coding protein psRNATarget
AK064761.1
ncRNA:20   GUGUCCACUGGGUGGACACU   1
  |||=*|*|||||||||||||
targets:61   CACGUGGGACCCACCUGUGA   80

3.0 Oryza sativa Japonica Group cDNA clone:002-120-H03, full insert sequence NA coding protein psRNATarget