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BaseInfo

ncRNA ID novel_zma_miR9272
Species Zea mays
Class miRNA
Genome position Chr6:144250982-144251054 [+]
Reference genome RefGen_v4
Source SRR4237223;SRR4237227
Length 22
Mature sequence(if miRNA) 52 - UCGAACGCGCAAGAGACAUGCG - 73
Stem-loop(if miRNA) --CAAC    G   A                UAUAU
      UCUC UGC UGUUCGAGAAAAAAAA     A
      |||| ||| ||||||||||||||||     A
      AGAG ACG GCAAGCUCUUUUUUUU     C
GCGUAC    A   C                UCGAA
Stem-loop sequence CAACUCUCGUGCAUGUUCGAGAAAAAAAAUAUAUAACAAGCUUUUUUUUUCUCGAACGCGCAAGAGACAUGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008662106.2
ncRNA:22   GCGUACAGAGAACGCGCAAGCU   1
  ||||||||||||||||||||||
targets:2443   CGCAUGUCUCUUGCGCGUUCGA   2464

0.0 PREDICTED: Zea mays putative ribonuclease H protein At1g65750 (LOC103639340), transcript variant X1, mRNA NA coding protein psRNATarget