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BaseInfo

ncRNA ID novel_zma_miR9266
Species Zea mays
Class miRNA
Genome position Chr6:112275155-112275209 [+]
Reference genome RefGen_v4
Source SRR4237223
Length 24
Mature sequence(if miRNA) 1 - GUCGGACGACUAAUCGUGAUUAGU - 24
Stem-loop(if miRNA) --    G                    G
  GUCG ACGACUAAUCGUGAUUAGUC G
  |||| ||||||||||||||||||||
  CAGC UGCUGAUUAGUGCUAAUUAG A
AU    -                    C
Stem-loop sequence GUCGGACGACUAAUCGUGAUUAGUCGGACGAUUAAUCGUGAUUAGUCGUCGACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008677323.2
ncRNA:24   UGAUUAGUGCUAAUCAGCAGGCUG   1
  |||||||=||||||||||||||||
targets:625   ACUAAUCGCGAUUAGUCGUCCGAC   648

1.0 PREDICTED: Zea mays uncharacterized LOC103651643 (LOC103651643), mRNA NA coding protein psRNATarget
XM_008661249.2
ncRNA:24   UGAUUAGUGCUAAUCAGCAGGCUG   1
  |||||*|=||||||||||||||||
targets:658   ACUAAACGCGAUUAGUCGUCCGAC   681

2.0 PREDICTED: Zea mays uncharacterized LOC103638297 (LOC103638297), transcript variant X1, mRNA NA coding protein psRNATarget