Search result

BaseInfo

ncRNA ID novel_zma_miR9258
Species Zea mays
Class miRNA
Genome position Chr10:140291004-140291098 [-]
Reference genome RefGen_v4
Source SRR4237223
Length 24
Mature sequence(if miRNA) 1 - AAUCUUAUACAAUCCACGUGGGAU - 24
Stem-loop(if miRNA) --UA           G          ---------        AAA    AA
    CAUGUGGAUUG AUGAGAUUGG         GUGGAUUU   UUUA  A
    ||||||||||| ||||||||||         ||||||||   ||||  C
    GUGCACCUAAC UAUUCUAACU         UACUUAAA   AAAU  A
UAGG           A          UUUUUUUAA        -AA    AA
Stem-loop sequence UACAUGUGGAUUGGAUGAGAUUGGGUGGAUUUAAAUUUAAAACAAAUAAAAAAAAUUCAUAAUUUUUUUUCAAUCUUAUACAAUCCACGUGGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008662339.2
ncRNA:24   UAGGGUGCACCUAACAUAUUCUAA   1
  ||||=|=|||||||||||=|||||
targets:1370   AUCCUAUGUGGAUUGUAUGAGAUU   1393

2.5 PREDICTED: Zea mays UDP-galactose/UDP-glucose transporter 4 (LOC103639606), mRNA NA coding protein psRNATarget