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BaseInfo

ncRNA ID novel_zma_miR9241
Species Zea mays
Class miRNA
Genome position Chr3:131621711-131621784 [+]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 1 - ACACUCGGUAAAGAAACUCUUUGC - 24
Stem-loop(if miRNA) --       GU   G   C       A       UUA
  ACACUCG  AAA AAA UCUUUGC GAGUGUU   U
  |||||||  ||| ||| ||||||| |||||||
  UGUGAGC  UUU UUU AGAAACG CUCACAG   U
UU       UG   A   A       G       UUU
Stem-loop sequence ACACUCGGUAAAGAAACUCUUUGCAGAGUGUUUUAUUUUUGACACUCGGCAAAGAAUUUAUUUGUCGAGUGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658185.2
ncRNA:24   CGUUUCUCAAAGAAAUGGCUCACA   1
  |=||||||*||*||||||||||||
targets:1666   GUAAAGAGCUUGUUUACCGAGUGU   1689

2.5 PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA NA coding protein psRNATarget