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BaseInfo

ncRNA ID novel_zma_miR9236
Species Zea mays
Class miRNA
Genome position Chr3:43522058-43522161 [-]
Reference genome RefGen_v4
Source SRR4237222
Length 22
Mature sequence(if miRNA) 83 - GCACCAUCGGACUGUCUGGUGG - 104
Stem-loop(if miRNA) --  A         --         -   CCA       AAGC      G  CGA
  GC CCAUCGGAC  UGUCUGGUG GCC   CAUGUCA    UCCAAC GU   A
  || |||||||||  ||||||||| |||   |||||||    |||||| ||   C
  CG GGUGGCCUG  ACAGGCCAC CGG   GUGUAGU    GGGUUG CA   C
CA  C         UG         A   UCG       ----      G  AUC
Stem-loop sequence GCACCAUCGGACUGUCUGGUGGCCCCACAUGUCAAAGCUCCAACGGUCGAACCCUAACGGUUGGGUGAUGUGGCUGGCACACCGGACAGUGUCCGGUGGCGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT065862.1
ncRNA:22   GGUGGUCUGUCAGGCUACCACG   1
  =||||=|||*||||||||||||
targets:1065   UCACCGGACUGUCCGAUGGUGC   1086

2.5 Zea mays full-length cDNA clone ZM_BFc0155J05 mRNA, complete cds NA coding protein psRNATarget
NM_001175661.1
ncRNA:22   GGUGGUCUGUCAGGCUACCACG   1
  =||||=|||*||||||||||||
targets:1065   UCACCGGACUGUCCGAUGGUGC   1086

2.5 Zea mays uncharacterized LOC100382977 (LOC100382977), mRNA NA coding protein psRNATarget