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BaseInfo

ncRNA ID	novel_zma_miR9235
Species	Zea mays
Class	miRNA
Genome position	Chr3:82026434-82026505 [-]
Reference genome	RefGen_v4
Source	SRR4237222
Length	20
Mature sequence(if miRNA)	53 - CGUGUGAGCUCACCCUUGCU - 72
Stem-loop(if miRNA)	--C     A    A C   --       --CACACC  C    GUGUG GCUC C CUU  GCUAUCU        CC A    ||||| |||| | |||  |||||||        ||    CACAC CGAG G GAA  UGGUGGA        GG C CAA     -    - A   UU       CAAGAACA  A
Stem-loop sequence	CGUGUGAGCUCACCCUUGCUAUCUCACACCCCCACAGGACAAGAACAGGUGGUUUAAGAGGAGCCACACAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT067944.2	ncRNA:20   UCGUUCCCACUCGAGUGUGC   1   ||||||||||||||||||=* targets:207   AGCAAGGGUGAGCUCACAUA   226 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0003J14 mRNA, complete cds	NA	coding protein	psRNATarget
BT062452.2	ncRNA:20   UCGUUCCCACUCGAGUGUGC   1   ||||||||||||||||||=* targets:212   AGCAAGGGUGAGCUCACAUA   231 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0299E23 mRNA, complete cds	NA	coding protein	psRNATarget
EU940976.1	ncRNA:20   UCGUUCCCACUCGAGUGUGC   1   ||||||||||||||||||=* targets:162   AGCAAGGGUGAGCUCACAUA   181 Target Full Sequence	2.5	Zea mays clone 1226050 mRNA sequence	NA	coding protein	psRNATarget
BT054110.2	ncRNA:20   UCGUUCCCACUCGAGUGUGC   1   ||||||||||||||||||=* targets:1461   AGCAAGGGUGAGCUCACAUA   1480 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0105J21 mRNA, complete cds	NA	coding protein	psRNATarget
BT019190.1	ncRNA:20   UCGUUCCCACUCGAGUGUGC   1   ||||=|||||||*||||||| targets:880   AGCAGGGGUGAGGUCACACG   899 Target Full Sequence	2.5	Zea mays clone Contig862.F mRNA sequence	NA	coding protein	psRNATarget
LQ235041.1	ncRNA:20   UCGUUCCCACUCGAGUGUGC   1   *|||||||||||||||||** targets:63   CGCAAGGGUGAGCUCACAAA   82 Target Full Sequence	2.5	Sequence 1036 from Patent EP2985353	NA	coding protein	psRNATarget
JB163372.1	ncRNA:20   UCGUUCCCACUCGAGUGUGC   1   *|||||||||||||||||** targets:63   CGCAAGGGUGAGCUCACAAA   82 Target Full Sequence	2.5	Sequence 1036 from Patent EP2559767	NA	coding protein	psRNATarget
HI402911.1	ncRNA:20   UCGUUCCCACUCGAGUGUGC   1   *|||||||||||||||||** targets:63   CGCAAGGGUGAGCUCACAAA   82 Target Full Sequence	2.5	Sequence 1036 from Patent EP2074227	NA	coding protein	psRNATarget