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BaseInfo

ncRNA ID	novel_zma_miR9233
Species	Zea mays
Class	miRNA
Genome position	Chr3:119172225-119172304 [-]
Reference genome	RefGen_v4
Source	SRR4237222;SRR4237225;SRR4237226
Length	21
Mature sequence(if miRNA)	1 - AUUUGUGGUCACAAUGUGAUA - 21
Stem-loop(if miRNA)	--C   U   G                       C  UCC    CAC UUG GAUUACAAAUAAGCUAAAAUAAG UA   A    ||| ||| ||||||||||||||||||||||| ||    GUG AAC CUGGUGUUUAUUUGAUUUUAUUC AU   A AUA   U   A                       A  CAU
Stem-loop sequence	CCACUUUGGGAUUACAAAUAAGCUAAAAUAAGCUAUCCAAUACUAACUUAUUUUAGUUUAUUUGUGGUCACAAUGUGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT064050.1	ncRNA:21   AUAGUGUAACACUGGUGUUUA   1   |||=||||||||||*|||||| targets:1568   UAUUACAUUGUGACAACAAAU   1588 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0133O08 mRNA, complete cds	NA	coding protein	psRNATarget
BT037552.1	ncRNA:21   AUAGUGUAACACUGGUGUUUA   1   |||=||||||||||*|||||| targets:1130   UAUUACAUUGUGACAACAAAU   1150 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0179C04 mRNA, complete cds	NA	coding protein	psRNATarget
BT037545.1	ncRNA:21   AUAGUGUAACACUGGUGUUUA   1   |||=||||||||||*|||||| targets:1029   UAUUACAUUGUGACAACAAAU   1049 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0178M07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001350229.1	ncRNA:21   AUAGUGUAACACUGGUGUUUA   1   |||=||||||||||*|||||| targets:1029   UAUUACAUUGUGACAACAAAU   1049 Target Full Sequence	2.5	Zea mays haloacid dehalogenase (HAD) superfamily protein (LOC100216900), mRNA	NA	coding protein	psRNATarget