ncRNA ID | novel_zma_miR9218 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:16219610-16219770 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237222 |
Length | 20 |
Mature sequence(if miRNA) | 142 - GUGCAGACCGCACCGGACCC - 161 |
Stem-loop(if miRNA) |
---G           A     C   A           AU        G      C                         A     UCGGUGCGGUC GCGCA CUG UCGGGGCUUCC  UAGUUAGA AGAGCC AGGGCUCUAAAUACUAUAUAUAUAU U     ||||||||||| ||||| ||| |||||||||||  |||||||| |||||| |||||||||||||||||||||||||     GGCCACGCCAG CGUGU GAC AGCCCCGAAGG  AUCAAUUU UCUCGG UUCCGAGAUUUAUGAUAUAUAUAUA A CCCA           A     A   C           AU        A      A                         U |
Stem-loop sequence | GUCGGUGCGGUCAGCGCACCUGAUCGGGGCUUCCAUUAGUUAGAGAGAGCCCAGGGCUCUAAAUACUAUAUAUAUAUAUAUAUAUAUAUAUAGUAUUUAGAGCCUUAGGCUCUAUUUAACUAUAGGAAGCCCCGACCAGAUGUGCAGACCGCACCGGACCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT067435.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0043G15 mRNA, complete cds | NA | coding protein | psRNATarget |