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BaseInfo

ncRNA ID	novel_zma_miR9207
Species	Zea mays
Class	miRNA
Genome position	Chr2:66526591-66526751 [+]
Reference genome	RefGen_v4
Source	SRR4237222
Length	22
Mature sequence(if miRNA)	1 - AGAAUUAAUAGUUAGUUGGCUA - 22
Stem-loop(if miRNA)	--                U        -----------AUU      --A  A    C AGCUAACAAACAACUAUCUAACUAUUAAC   AGAAUUAAUAGUUAGU GGCUAAAA              AUUAGU   AA UUAG U                             U   |||||||||||||||| ||||||||              ||||||   || |||| |                             A   UCUUGAUUAUCAAUCA CUGAUUUU              UUUUGU   AU CGAU U                             A CA                -        AAUCAACUCUGUAG      GAG  -    - AUCAAAUCGAUAAUUAAUAAAAACCAUUU
Stem-loop sequence	AGAAUUAAUAGUUAGUUGGCUAAAAAUUAUUAGUAAAAUUAGCUAGCUAACAAACAACUAUCUAACUAUUAACUAAUUUACCAAAAAUAAUUAAUAGCUAAACUAUUAGCUAGAGUGUUUUGAUGUCUCAACUAAUUUUAGUCACUAACUAUUAGUUCUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT041400.1	ncRNA:22   AUCGGUUGAUUGAUAAUUAAGA   1   |||=|||||||||||||=|||| targets:1815   UAGUCAACUAACUAUUAGUUCU   1836 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0115C19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147983.1	ncRNA:22   AUCGGUUGAUUGAUAAUUAAGA   1   |||=|||||||||||||=|||| targets:1815   UAGUCAACUAACUAUUAGUUCU   1836 Target Full Sequence	2.5	Zea mays zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (LOC100273565), mRNA	NA	coding protein	psRNATarget
EZ105418.1	ncRNA:22   AUCGGUUGAUUGAUAAUUAAGA   1   |||=|||||||||||||=|||| targets:88   UAGUCAACUAACUAUUAGUUCU   109 Target Full Sequence	2.5	TSA: Zea mays contig41075, mRNA sequence	NA	coding protein	psRNATarget
BT069057.2	ncRNA:22   AUCGGUUGAUUGAUAAUUAAGA   1   ||||||||||||||||||||=* targets:911   UAGCCAACUAACUAUUAAUUUC   932 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0151M04 mRNA, complete cds	NA	coding protein	psRNATarget