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BaseInfo

ncRNA ID novel_zma_miR9194
Species Zea mays
Class miRNA
Genome position Chr2:116764104-116764195 [-]
Reference genome RefGen_v4
Source SRR4237222
Length 23
Mature sequence(if miRNA) 1 - AAUCCCACCCAAUCCACAUGGUU - 23
Stem-loop(if miRNA) --             A    -    -    GUAUUG    G   UU G
  CCAUGUGGAUUGG GUGG AUUG GUUG      AGAU UAU  U A
  ||||||||||||| |||| |||| ||||      |||| |||  | C
  GGUACACCUAACC CACC UAAC CAGU      UUUA GUA  G U
UU             -    C    U    --AAAA    G   UU U
Stem-loop sequence CCAUGUGGAUUGGAGUGGAUUGGUUGGUAUUGAGAUGUAUUUUGACUUGUUAUGGAUUUAAAAUGACUCAAUCCCACCCAAUCCACAUGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407028.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:4   AAUCCAUGUGGAUUGGGUGGGAUU   27

0.0 Sequence 5153 from Patent EP2074227 NA coding protein psRNATarget
LQ239158.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:4   AAUCCAUGUGGAUUGGGUGGGAUU   27

0.0 Sequence 5153 from Patent EP2985353 NA coding protein psRNATarget
JB167489.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:4   AAUCCAUGUGGAUUGGGUGGGAUU   27

0.0 Sequence 5153 from Patent EP2559767 NA coding protein psRNATarget
JB170105.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:28   AAUCCAUGUGGAUUGGGUGGGAUU   51

0.0 Sequence 7769 from Patent EP2559767 NA coding protein psRNATarget
HI409644.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:28   AAUCCAUGUGGAUUGGGUGGGAUU   51

0.0 Sequence 7769 from Patent EP2074227 NA coding protein psRNATarget
LQ241774.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:28   AAUCCAUGUGGAUUGGGUGGGAUU   51

0.0 Sequence 7769 from Patent EP2985353 NA coding protein psRNATarget
BT083591.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:1114   AAUCCAUGUGGAUUGGGUGGGAUU   1137

0.0 Zea mays full-length cDNA clone ZM_BFb0016I19 mRNA, complete cds NA coding protein psRNATarget
NM_001158639.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:1218   AAUCCAUGUGGAUUGGGUGGGAUU   1241

0.0 Zea mays coiled-coil-helix-coiled-coil-helix domain-containing protein 4 (LOC100285749), mRNA NA coding protein psRNATarget
EU973712.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:1218   AAUCCAUGUGGAUUGGGUGGGAUU   1241

0.0 Zea mays clone 407236 coiled-coil-helix-coiled-coil-helix domain-containing protein 4 mRNA, complete cds NA coding protein psRNATarget
XM_008674543.2
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:2430   AAUCCAUGUGGAUUGGGUGGGAUU   2453

0.0 PREDICTED: Zea mays Peptidase M28 family protein (cl4954_1), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020552475.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:2672   AAUCCAUGUGGAUUGGGUGGGAUU   2695

0.0 PREDICTED: Zea mays exocyst complex component SEC3A-like (LOC103652873), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020552473.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||||||
targets:2955   AAUCCAUGUGGAUUGGGUGGGAUU   2978

0.0 PREDICTED: Zea mays exocyst complex component SEC3A-like (LOC103652873), transcript variant X1, mRNA NA coding protein psRNATarget
EZ056736.1
ncRNA:23   UUG-GUACACCUAACCCACCCUAA   1
  ||=-||||||||||||||||||||
targets:111   AAUUCAUGUGGAUUGGGUGGGAUU   134

0.0 TSA: Zea mays contig57858, mRNA sequence NA coding protein psRNATarget
JB163795.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1459 from Patent EP2559767 NA coding protein psRNATarget
LQ235464.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1459 from Patent EP2985353 NA coding protein psRNATarget
HI403334.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1459 from Patent EP2074227 NA coding protein psRNATarget
LQ242244.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:7   AAUCCAUGUGGAUUGGGUGGAAUU   30

1.5 Sequence 8239 from Patent EP2985353 NA coding protein psRNATarget
HI410114.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:7   AAUCCAUGUGGAUUGGGUGGAAUU   30

1.5 Sequence 8239 from Patent EP2074227 NA coding protein psRNATarget
JB170575.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:7   AAUCCAUGUGGAUUGGGUGGAAUU   30

1.5 Sequence 8239 from Patent EP2559767 NA coding protein psRNATarget
HI403293.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1418 from Patent EP2074227 NA coding protein psRNATarget
HI403335.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1460 from Patent EP2074227 NA coding protein psRNATarget
LQ235465.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1460 from Patent EP2985353 NA coding protein psRNATarget
JB163796.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1460 from Patent EP2559767 NA coding protein psRNATarget
JB163754.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1418 from Patent EP2559767 NA coding protein psRNATarget
LQ235423.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:9   AAUCCAUGUGGAUUGAGUGGGAUU   32

1.5 Sequence 1418 from Patent EP2985353 NA coding protein psRNATarget
HI406166.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||*||||||||||||||
targets:8   AAUCCAUGUAGAUUGGGUGGGAUU   31

1.0 Sequence 4291 from Patent EP2074227 NA coding protein psRNATarget
LQ238296.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||*||||||||||||||
targets:8   AAUCCAUGUAGAUUGGGUGGGAUU   31

1.0 Sequence 4291 from Patent EP2985353 NA coding protein psRNATarget
JB166627.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||*||||||||||||||
targets:8   AAUCCAUGUAGAUUGGGUGGGAUU   31

1.0 Sequence 4291 from Patent EP2559767 NA coding protein psRNATarget
EZ099428.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:29   AAUCCAUGUGGAUUGGGUGGUAUU   52

1.5 TSA: Zea mays contig35083, mRNA sequence NA coding protein psRNATarget
JB166349.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

1.5 Sequence 4013 from Patent EP2559767 NA coding protein psRNATarget
JB166356.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

1.5 Sequence 4020 from Patent EP2559767 NA coding protein psRNATarget
HI405895.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

1.5 Sequence 4020 from Patent EP2074227 NA coding protein psRNATarget
HI405888.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

1.5 Sequence 4013 from Patent EP2074227 NA coding protein psRNATarget
LQ238018.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

1.5 Sequence 4013 from Patent EP2985353 NA coding protein psRNATarget
LQ238025.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:12   AAUCCAUGUGGAUUGAGUGGGAUU   35

1.5 Sequence 4020 from Patent EP2985353 NA coding protein psRNATarget
HI403302.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||*|||||||||
targets:17   AAUCCAUGUGGAUUAGGUGGGAUU   40

1.5 Sequence 1427 from Patent EP2074227 NA coding protein psRNATarget
JB163763.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||*|||||||||
targets:17   AAUCCAUGUGGAUUAGGUGGGAUU   40

1.5 Sequence 1427 from Patent EP2559767 NA coding protein psRNATarget
LQ235432.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||*|||||||||
targets:17   AAUCCAUGUGGAUUAGGUGGGAUU   40

1.5 Sequence 1427 from Patent EP2985353 NA coding protein psRNATarget
HI405827.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:19   AAUCCAUGUGGAUUGAGUGGGAUU   42

1.5 Sequence 3952 from Patent EP2074227 NA coding protein psRNATarget
LQ237957.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:19   AAUCCAUGUGGAUUGAGUGGGAUU   42

1.5 Sequence 3952 from Patent EP2985353 NA coding protein psRNATarget
JB166288.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:19   AAUCCAUGUGGAUUGAGUGGGAUU   42

1.5 Sequence 3952 from Patent EP2559767 NA coding protein psRNATarget
JB166298.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3962 from Patent EP2559767 NA coding protein psRNATarget
LQ237967.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3962 from Patent EP2985353 NA coding protein psRNATarget
LQ237974.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3969 from Patent EP2985353 NA coding protein psRNATarget
HI405844.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3969 from Patent EP2074227 NA coding protein psRNATarget
JB166305.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3969 from Patent EP2559767 NA coding protein psRNATarget
HI405837.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3962 from Patent EP2074227 NA coding protein psRNATarget
HI405845.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3970 from Patent EP2074227 NA coding protein psRNATarget
JB166306.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3970 from Patent EP2559767 NA coding protein psRNATarget
HI405821.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3946 from Patent EP2074227 NA coding protein psRNATarget
JB166309.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3973 from Patent EP2559767 NA coding protein psRNATarget
LQ237953.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3948 from Patent EP2985353 NA coding protein psRNATarget
LQ237965.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3960 from Patent EP2985353 NA coding protein psRNATarget
JB166296.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3960 from Patent EP2559767 NA coding protein psRNATarget
HI405825.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3950 from Patent EP2074227 NA coding protein psRNATarget
HI405851.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3976 from Patent EP2074227 NA coding protein psRNATarget
LQ237951.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3946 from Patent EP2985353 NA coding protein psRNATarget
JB166312.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3976 from Patent EP2559767 NA coding protein psRNATarget
JB166284.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3948 from Patent EP2559767 NA coding protein psRNATarget
JB166282.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3946 from Patent EP2559767 NA coding protein psRNATarget
HI405823.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3948 from Patent EP2074227 NA coding protein psRNATarget
HI405835.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3960 from Patent EP2074227 NA coding protein psRNATarget
JB166286.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3950 from Patent EP2559767 NA coding protein psRNATarget
HI405848.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3973 from Patent EP2074227 NA coding protein psRNATarget
LQ237955.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3950 from Patent EP2985353 NA coding protein psRNATarget
LQ237975.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3970 from Patent EP2985353 NA coding protein psRNATarget
LQ237981.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3976 from Patent EP2985353 NA coding protein psRNATarget
LQ237978.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3973 from Patent EP2985353 NA coding protein psRNATarget
HI405833.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3958 from Patent EP2074227 NA coding protein psRNATarget
HI405829.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3954 from Patent EP2074227 NA coding protein psRNATarget
JB166294.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3958 from Patent EP2559767 NA coding protein psRNATarget
LQ237963.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3958 from Patent EP2985353 NA coding protein psRNATarget
JB166290.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3954 from Patent EP2559767 NA coding protein psRNATarget
LQ237959.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3954 from Patent EP2985353 NA coding protein psRNATarget
EZ107685.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:22   AAUCCAUGUGGAUUGAGUGGGAUU   45

1.5 TSA: Zea mays contig43343, mRNA sequence NA coding protein psRNATarget
JB163448.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

1.5 Sequence 1112 from Patent EP2559767 NA coding protein psRNATarget
LQ235117.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

1.5 Sequence 1112 from Patent EP2985353 NA coding protein psRNATarget
HI403092.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

1.5 Sequence 1217 from Patent EP2074227 NA coding protein psRNATarget
JB163553.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

1.5 Sequence 1217 from Patent EP2559767 NA coding protein psRNATarget
HI402987.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

1.5 Sequence 1112 from Patent EP2074227 NA coding protein psRNATarget
LQ235222.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:32   AAUCCAUGUGGAUUGAGUGGGAUU   55

1.5 Sequence 1217 from Patent EP2985353 NA coding protein psRNATarget
EZ066328.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:5   AAUCCAUGUGGAUUGGGUGGUAUU   28

1.5 TSA: Zea mays contig01962, mRNA sequence NA coding protein psRNATarget
JB166283.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
JB166283.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:163   AAUCCAUGUGGAUUGAGUGGGAUU   186

1.5 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
LQ237952.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
LQ237952.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:163   AAUCCAUGUGGAUUGAGUGGGAUU   186

1.5 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
HI405822.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:23   AAUCCAUGUGGAUUGAGUGGGAUU   46

1.5 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
HI405822.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:163   AAUCCAUGUGGAUUGAGUGGGAUU   186

1.5 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
EU944907.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:272   AAUCCAUGUGGAUUGAGUGGGAUU   295

1.5 Zea mays clone 235115 mRNA sequence NA coding protein psRNATarget
EU968099.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:156   AAUCCAUGUGGAUUGAGUGGGAUU   179

1.5 Zea mays clone 314232 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
AY111036.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:106   AAUCCAUGUGGAUUGAGUGGGAUU   129

1.5 Zea mays CL1582_4 mRNA sequence NA coding protein psRNATarget
AY112063.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:571   AAUCCAUGUGGAUUGGGUGGUAUU   594

1.5 Zea mays CL922_1 mRNA sequence NA coding protein psRNATarget
AY112156.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:82   AAUCCAUGUGGAUUGAGUGGGAUU   105

1.5 Zea mays CL1582_10 mRNA sequence NA coding protein psRNATarget
XM_008657627.2
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:685   AAUCCAUGUGGAUUGGGUGGUAUU   708

1.5 PREDICTED: Zea mays cell wall / vacuolar inhibitor of fructosidase 2 (LOC103635072), mRNA NA coding protein psRNATarget
BT061688.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:918   AAUCCAUGUGGAUUGAGUGGGAUU   941

1.5 Zea mays full-length cDNA clone ZM_BFb0175E10 mRNA, complete cds NA coding protein psRNATarget
AY105812.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:969   AAUCCAUGUGGAUUGAGUGGGAUU   992

1.5 Zea mays PCO140232 mRNA sequence NA coding protein psRNATarget
BT018093.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1084   AAUCCAUGUGGAUUGAGUGGGAUU   1107

1.5 Zea mays clone EL01N0552E08.c mRNA sequence NA coding protein psRNATarget
BT016884.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:187   AAUCCAUGUGGAUUGGGUGGUAUU   210

1.5 Zea mays clone Contig717 mRNA sequence NA coding protein psRNATarget
BT018592.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1028   AAUCCAUGUGGAUUGAGUGGGAUU   1051

1.5 Zea mays clone EL01N0447E06.d mRNA sequence NA coding protein psRNATarget
BT017852.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:870   AAUCCAUGUGGAUUGAGUGGGAUU   893

1.5 Zea mays clone EL01N0511C01.c mRNA sequence NA coding protein psRNATarget
EU960828.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:927   AAUCCAUGUGGAUUGAGUGGGAUU   950

1.5 Zea mays clone 228913 exosome complex exonuclease RRP41 mRNA, complete cds NA coding protein psRNATarget
BT086570.2
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:147   AAUCCAUGUGGAUUGAGUGGGAUU   170

1.5 Zea mays full-length cDNA clone ZM_BFc0184M19 mRNA, complete cds NA coding protein psRNATarget
EU966790.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1405   AAUCCAUGUGGAUUGAGUGGGAUU   1428

1.5 Zea mays clone 297432 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
EU962948.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1405   AAUCCAUGUGGAUUGAGUGGGAUU   1428

1.5 Zea mays clone 246807 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
EU966290.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1449   AAUCCAUGUGGAUUGAGUGGGAUU   1472

1.5 Zea mays clone 293206 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
NM_001156787.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1449   AAUCCAUGUGGAUUGAGUGGGAUU   1472

1.5 Zea mays pyruvate dehydrogenase E1 component alpha subunit (LOC100283889), mRNA NA coding protein psRNATarget
NM_001175812.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1454   AAUCCAUGUGGAUUGAGUGGGAUU   1477

1.5 Zea mays uncharacterized LOC100383146 (LOC100383146), mRNA NA coding protein psRNATarget
BT066364.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1454   AAUCCAUGUGGAUUGAGUGGGAUU   1477

1.5 Zea mays full-length cDNA clone ZM_BFc0009H06 mRNA, complete cds NA coding protein psRNATarget
AY103588.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1423   AAUCCAUGUGGAUUGAGUGGGAUU   1446

1.5 Zea mays PCO114222 mRNA sequence NA coding protein psRNATarget
EU964623.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1446   AAUCCAUGUGGAUUGAGUGGGAUU   1469

1.5 Zea mays clone 280415 sorting nexin 1 mRNA, complete cds NA coding protein psRNATarget
BT018572.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:1770   AAUCCAUGUGGAUUGAGUGGGAUU   1793

1.5 Zea mays clone EL01N0443D02.d mRNA sequence NA coding protein psRNATarget
XM_008651215.2
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:388   AAUCCAUGUGGAUUGAGUGGGAUU   411

1.5 PREDICTED: Zea mays putative domain of unknown function (DUF641) containing family protein (LOC103630129), mRNA NA coding protein psRNATarget
XM_008674507.2
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:2623   AAUCCAUGUGGAUUGGGUGGUAUU   2646

1.5 PREDICTED: Zea mays MADS transcription factor (MADS36), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020549676.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||||||||*|||
targets:2708   AAUCCAUGUGGAUUGGGUGGUAUU   2731

1.5 PREDICTED: Zea mays MADS transcription factor (MADS36), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550022.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:3617   AAUCCAUGUGGAUUGAGUGGGAUU   3640

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X8, mRNA NA coding protein psRNATarget
XM_020550024.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:3641   AAUCCAUGUGGAUUGAGUGGGAUU   3664

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020550021.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:3695   AAUCCAUGUGGAUUGAGUGGGAUU   3718

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020550020.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:3689   AAUCCAUGUGGAUUGAGUGGGAUU   3712

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020550017.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:3697   AAUCCAUGUGGAUUGAGUGGGAUU   3720

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550019.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:3684   AAUCCAUGUGGAUUGAGUGGGAUU   3707

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020550016.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:3759   AAUCCAUGUGGAUUGAGUGGGAUU   3782

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020551710.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:3242   AAUCCAUGUGGAUUGAGUGGGAUU   3265

1.5 PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550018.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:4083   AAUCCAUGUGGAUUGAGUGGGAUU   4106

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020550015.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:4179   AAUCCAUGUGGAUUGAGUGGGAUU   4202

1.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551708.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:4877   AAUCCAUGUGGAUUGAGUGGGAUU   4900

1.5 PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008676887.2
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||||||||*||||||||
targets:2574   AAUCCAUGUGGAUUGAGUGGGAUU   2597

1.5 PREDICTED: Zea mays lectin-like receptor kinase 7 (LOC100281599), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020539455.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-|||||||||||*|||||||||
targets:210   AAUCCAUGUGGAUUAGGUGGGAUU   233

1.5 PREDICTED: Zea mays Putative ARM repeat-containing protein containing family protein (LOC103629927), transcript variant X1, mRNA NA coding protein psRNATarget
JB169676.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  **|||||||||||||*|||||||
targets:8   UCCCAUGUGGAUUGGAUGGGAUU   30

1.5 Sequence 7340 from Patent EP2559767 NA coding protein psRNATarget
HI409215.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  **|||||||||||||*|||||||
targets:8   UCCCAUGUGGAUUGGAUGGGAUU   30

1.5 Sequence 7340 from Patent EP2074227 NA coding protein psRNATarget
LQ241345.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  **|||||||||||||*|||||||
targets:8   UCCCAUGUGGAUUGGAUGGGAUU   30

1.5 Sequence 7340 from Patent EP2985353 NA coding protein psRNATarget
LQ238006.1
ncRNA:23   UUG-GUACACCUAACCCACCCUAA   1
  ||=-|||||||||||*||||||||
targets:21   AAUUCAUGUGGAUUGAGUGGGAUU   44

1.5 Sequence 4001 from Patent EP2985353 NA coding protein psRNATarget
HI405876.1
ncRNA:23   UUG-GUACACCUAACCCACCCUAA   1
  ||=-|||||||||||*||||||||
targets:21   AAUUCAUGUGGAUUGAGUGGGAUU   44

1.5 Sequence 4001 from Patent EP2074227 NA coding protein psRNATarget
JB166337.1
ncRNA:23   UUG-GUACACCUAACCCACCCUAA   1
  ||=-|||||||||||*||||||||
targets:21   AAUUCAUGUGGAUUGAGUGGGAUU   44

1.5 Sequence 4001 from Patent EP2559767 NA coding protein psRNATarget
EU946745.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  =*||||||||||||*||||||||
targets:483   GUCCAUGUGGAUUGAGUGGGAUU   505

1.5 Zea mays clone 323251 mRNA sequence NA coding protein psRNATarget
BT040160.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  **|||||||||||||*|||||||
targets:973   UCCCAUGUGGAUUGGAUGGGAUU   995

1.5 Zea mays full-length cDNA clone ZM_BFc0068H20 mRNA, complete cds NA coding protein psRNATarget
EU976224.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  =*|||||||||||||||||*|||
targets:799   GUCCAUGUGGAUUGGGUGGUAUU   821

1.5 Zea mays clone 688476 mRNA sequence NA coding protein psRNATarget
BT070074.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  =*|||||||||||||||||*|||
targets:988   GUCCAUGUGGAUUGGGUGGUAUU   1010

1.5 Zea mays full-length cDNA clone ZM_BFb0372E16 mRNA, complete cds NA coding protein psRNATarget
XM_020549619.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  =*|||||||||||||||||*|||
targets:3766   GUCCAUGUGGAUUGGGUGGUAUU   3788

1.5 PREDICTED: Zea mays glucosamine fructose-6-phosphate aminotransferase1 (LOC100276333), transcript variant X14, mRNA NA coding protein psRNATarget
LQ241402.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  ***||||||||||||*|||||||
targets:8   UCACAUGUGGAUUGGAUGGGAUU   30

1.5 Sequence 7397 from Patent EP2985353 NA coding protein psRNATarget
JB169733.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  ***||||||||||||*|||||||
targets:8   UCACAUGUGGAUUGGAUGGGAUU   30

1.5 Sequence 7397 from Patent EP2559767 NA coding protein psRNATarget
HI409272.1
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  ***||||||||||||*|||||||
targets:8   UCACAUGUGGAUUGGAUGGGAUU   30

1.5 Sequence 7397 from Patent EP2074227 NA coding protein psRNATarget
JB166417.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||*|||||||*||||||||
targets:4   AAUCCAUAUGGAUUGAGUGGGAUU   27

2.5 Sequence 4081 from Patent EP2559767 NA coding protein psRNATarget
HI405956.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||*|||||||*||||||||
targets:4   AAUCCAUAUGGAUUGAGUGGGAUU   27

2.5 Sequence 4081 from Patent EP2074227 NA coding protein psRNATarget
LQ238086.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||*|||||||*||||||||
targets:4   AAUCCAUAUGGAUUGAGUGGGAUU   27

2.5 Sequence 4081 from Patent EP2985353 NA coding protein psRNATarget
XM_008660174.2
ncRNA:23   UUGGUACACCUAACCCACCCUAA   1
  **|||||||||||||*||||||*
targets:3526   UCCCAUGUGGAUUGGAUGGGAUC   3548

2.5 PREDICTED: Zea mays Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic (LOC100276880), transcript variant X2, mRNA NA coding protein psRNATarget
BT068216.1
ncRNA:23   UU-GGUACACCUAACCCACCCUAA   1
  ||-||||||*|||||*||||||||
targets:828   AAUCCAUGUAGAUUGAGUGGGAUU   851

2.5 Zea mays full-length cDNA clone ZM_BFb0082C11 mRNA, complete cds NA coding protein psRNATarget
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