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BaseInfo

ncRNA ID osa-miRf10516-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - GGACUGUUUGGGGGAGCUUCUGGCA - NA
Stem-loop(if miRNA)     -     G               A  UG  A   U
GGAC UGUUU GGGGAGCUUCUGGCA CU  AG UUC A
|||| ||||| ||||||||||||||| ||  || ||| G
CCUG ACAAA CCCCUCGAAGAUCGU GA  UC AAG G
    G     A               C  CG  G   A
Stem-loop sequence GGACUGUUUGGGGGAGCUUCUGGCAACUUGAGAUUCUAGGAGAAGCUGCAGCUGCUAGAAGCUCCCCAAAACAGGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK067885.1
ncRNA:25   ACGGUCUUCGAGGGGGUUUGUCAGG   1
  |||=|||||||*||=||||||||||
targets:1157   UGCUAGAAGCUGCCUCAAACAGUCC   1181

2.5 Oryza sativa Japonica Group cDNA clone:J013123F22, full insert sequence NA coding protein psRNATarget
XM_015768499.1
ncRNA:25   ACGGUCUUCGAGGGGGUUUGUCAGG   1
  |||=||||||*||||*|||||||||
targets:1307   UGCUAGAAGCCCCCCAAAACAGUCC   1331

2.5 PREDICTED: Oryza sativa Japonica Group calcineurin B-like protein 8 (LOC107276173), transcript variant X2, mRNA calcineurin B-like protein 8(LOC107276173) coding protein psRNATarget
XM_015768498.1
ncRNA:25   ACGGUCUUCGAGGGGGUUUGUCAGG   1
  |||=||||||*||||*|||||||||
targets:1340   UGCUAGAAGCCCCCCAAAACAGUCC   1364

2.5 PREDICTED: Oryza sativa Japonica Group calcineurin B-like protein 8 (LOC107276173), transcript variant X1, mRNA calcineurin B-like protein 8(LOC107276173) coding protein psRNATarget
AK064146.1
ncRNA:25   ACGGUCUUCGAGGGGGUUUGUCAGG   1
  **=|||||*||||||||||||||=|
targets:1138   AAUCAGAAACUCCCCCAAACAGUUC   1162

2.5 Oryza sativa Japonica Group cDNA clone:002-103-C06, full insert sequence NA coding protein psRNATarget