Search result

BaseInfo

ncRNA ID	osa-miRf10515-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUGCUAGAAGCUCCCCAAAACAG - NA
Stem-loop(if miRNA)	-     G               A  UG  A   U GGAC UGUUU GGGGAGCUUCUGGCA CU  AG UUC A |||| ||||| ||||||||||||||| ||  || ||| G CCUG ACAAA CCCCUCGAAGAUCGU GA  UC AAG G     G     A               C  CG  G   A
Stem-loop sequence	GGACUGUUUGGGGGAGCUUCUGGCAACUUGAGAUUCUAGGAGAAGCUGCAGCUGCUAGAAGCUCCCCAAAACAGGUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK120042.1	ncRNA:23   GACAAAACCCCUCGAAGAUCGUC   1   ||||||*|||*|||||||||||| targets:440   CUGUUUGGGGCAGCUUCUAGCAG   462 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-188-E11, full insert sequence	NA	coding protein	psRNATarget
AK063336.1	ncRNA:23   GACAAAACCCCUCGAAGAUCGUC   1   ||||||*|||*|||||||||||| targets:1675   CUGUUUGGGGCAGCUUCUAGCAG   1697 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-114-A07, full insert sequence	NA	coding protein	psRNATarget
AK288425.1	ncRNA:23   GACAAAACCCCUCGAAGAUCGUC   1   ||||||*|||*|||||||||||| targets:1245   CUGUUUGGGGCAGCUUCUAGCAG   1267 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032K06, full insert sequence	NA	coding protein	psRNATarget
XM_015783080.1	ncRNA:23   GACAAAACCCCUCGAAGAUCGUC   1   ||||||*|||*|||||||||||| targets:2292   CUGUUUGGGGCAGCUUCUAGCAG   2314 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein ZINC INDUCED FACILITATOR 1 (LOC4338249), mRNA	protein ZINC INDUCED FACILITATOR 1(LOC4338249)	coding protein	psRNATarget