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BaseInfo

ncRNA ID	novel_zma_miR9167
Species	Zea mays
Class	miRNA
Genome position	Chr1:3855957-3856030 [-]
Reference genome	RefGen_v4
Source	SRR4237222;SRR4237223
Length	24
Mature sequence(if miRNA)	51 - AACACUCGGCAAAGGACUCUUUGC - 74
Stem-loop(if miRNA)	--              GA               CACA   AACACUCGGCAAAG  CUCUUUGCCGAGUGU    G   ||||||||||||||  |||||||||||||||   UUGUGAGCCGUUUC  GAGAAACGGCUCACA    A UU              UC               ACAU
Stem-loop sequence	AACACUCGGCAAAGGACUCUUUGCCGAGUGUCACAGAUACAACACUCGGCAAAGAGCUCUUUGCCGAGUGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU949560.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||=||=|||||||||||||| targets:585   GCAAAGGGUUCUUUGCCGAGUGUU   608 Target Full Sequence	2.0	Zea mays clone 424771 mRNA sequence	NA	coding protein	psRNATarget
LQ238823.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||||*=|||||||||||||| targets:100   GCAAAGAGCUCUUUGCCGAGUGUU   123 Target Full Sequence	2.0	Sequence 4818 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238823.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||||*=|||||||||||||* targets:60   GCAAAGAGCUCUUUGCCGAGUGUC   83 Target Full Sequence	3.0	Sequence 4818 from Patent EP2985353	NA	coding protein	psRNATarget
HI406693.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||||*=|||||||||||||| targets:100   GCAAAGAGCUCUUUGCCGAGUGUU   123 Target Full Sequence	2.0	Sequence 4818 from Patent EP2074227	NA	coding protein	psRNATarget
HI406693.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||||*=|||||||||||||* targets:60   GCAAAGAGCUCUUUGCCGAGUGUC   83 Target Full Sequence	3.0	Sequence 4818 from Patent EP2074227	NA	coding protein	psRNATarget
JB167154.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||||*=|||||||||||||| targets:100   GCAAAGAGCUCUUUGCCGAGUGUU   123 Target Full Sequence	2.0	Sequence 4818 from Patent EP2559767	NA	coding protein	psRNATarget
JB167154.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||||*=|||||||||||||* targets:60   GCAAAGAGCUCUUUGCCGAGUGUC   83 Target Full Sequence	3.0	Sequence 4818 from Patent EP2559767	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||||*=|||||||||||||| targets:1980   GCAAAGAGCUCUUUGCCGAGUGUU   2003 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   ||||||||*=|||||||||||||| targets:1980   GCAAAGAGCUCUUUGCCGAGUGUU   2003 Target Full Sequence	2.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
JB166664.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   *==|*|=*|=|||||||||||||| targets:1   CUGACGGAUUCUUUGCCGAGUGUU   24 Target Full Sequence	3.0	Sequence 4328 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238333.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   *==|*|=*|=|||||||||||||| targets:1   CUGACGGAUUCUUUGCCGAGUGUU   24 Target Full Sequence	3.0	Sequence 4328 from Patent EP2985353	NA	coding protein	psRNATarget
HI406203.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   *==|*|=*|=|||||||||||||| targets:1   CUGACGGAUUCUUUGCCGAGUGUU   24 Target Full Sequence	3.0	Sequence 4328 from Patent EP2074227	NA	coding protein	psRNATarget
JB167479.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   |||||||**||||||||||||||* targets:50   GCAAAGAAGCCUUUGCCGAGUGUA   73 Target Full Sequence	3.0	Sequence 5143 from Patent EP2559767	NA	coding protein	psRNATarget
HI407018.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   |||||||**||||||||||||||* targets:50   GCAAAGAAGCCUUUGCCGAGUGUA   73 Target Full Sequence	3.0	Sequence 5143 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239148.1	ncRNA:24   CGUUUCUCAGGAAACGGCUCACAA   1   |||||||**||||||||||||||* targets:50   GCAAAGAAGCCUUUGCCGAGUGUA   73 Target Full Sequence	3.0	Sequence 5143 from Patent EP2985353	NA	coding protein	psRNATarget