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BaseInfo

ncRNA ID	novel_zma_miR9160
Species	Zea mays
Class	miRNA
Genome position	Chr1:56190150-56190211 [-]
Reference genome	RefGen_v4
Source	SRR4237222
Length	23
Mature sequence(if miRNA)	40 - ACCGGACAGCUACUGUGCACUGU - 62
Stem-loop(if miRNA)	--         -    U    A         G   ACCGGACAG CUAC GUGC CUGUCUGGU U   ||||||||| |||| |||| |||||||||   UGGCCUGUC GAUG CACG GACAGGCCA G CG         A    U    -         C
Stem-loop sequence	ACCGGACAGCUACUGUGCACUGUCUGGUGUGCACCGGACAGGCACUGUAGACUGUCCGGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ097181.1	ncRNA:23   UGUCACGUGUCAUCGACAGGCCA   1   |||*||||||||=|||||||||| targets:61   ACAAUGCACAGUGGCUGUCCGGU   83 Target Full Sequence	1.5	TSA: Zea mays contig32836, mRNA sequence	NA	coding protein	psRNATarget
NM_001349964.1	ncRNA:23   UGUCACGUGUCAUCGACAGGCCA   1   ||||||*|=|||||||||||||| targets:2684   ACAGUGAAUAGUAGCUGUCCGGU   2706 Target Full Sequence	2.0	Zea mays uncharacterized LOC100278112 (IDP592), mRNA	NA	coding protein	psRNATarget
LQ238952.1	ncRNA:23   UGUCACGUGUCAUCGACAGGCCA   1   *=|*|||||||*||||||||||| targets:8   CUAUUGCACAGGAGCUGUCCGGU   30 Target Full Sequence	1.5	Sequence 4947 from Patent EP2985353	NA	coding protein	psRNATarget
HI406822.1	ncRNA:23   UGUCACGUGUCAUCGACAGGCCA   1   *=|*|||||||*||||||||||| targets:8   CUAUUGCACAGGAGCUGUCCGGU   30 Target Full Sequence	1.5	Sequence 4947 from Patent EP2074227	NA	coding protein	psRNATarget
JB167283.1	ncRNA:23   UGUCACGUGUCAUCGACAGGCCA   1   *=|*|||||||*||||||||||| targets:8   CUAUUGCACAGGAGCUGUCCGGU   30 Target Full Sequence	1.5	Sequence 4947 from Patent EP2559767	NA	coding protein	psRNATarget
BT065201.2	ncRNA:23   UGUCACGUGUCAUCGACAGGCCA   1   |||*||*|||||||*|||||||| targets:618   ACACUGAACAGUAGAUGUCCGGU   640 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
BT061123.2	ncRNA:23   UGUCACGUGUCAUCGACAGGCCA   1   |||*||*|||||||*|||||||| targets:170   ACACUGAACAGUAGAUGUCCGGU   192 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget