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BaseInfo

ncRNA ID novel_zma_miR9138
Species Zea mays
Class miRNA
Genome position Chr10:122678912-122679001 [-]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 1 - CGGUACUCGCUGACAGACGAUGAC - 24
Stem-loop(if miRNA) --       GC UG   UC       ---------ACA  UUCAGGAGCA
  UAUUGUC  U  GCG  GGUAUUG            UC          U
  |||||||  |  |||  |||||||            ||          A
  GUAGCAG  A  CGC  UCAUGGC            CG          G
CA       AC GU   --       CCUAUCCAAAGA  UCAACAGGGC
Stem-loop sequence UAUUGUCGCUUGGCGUCGGUAUUGACAUCUUCAGGAGCAUAGCGGGACAACUGCAGAAACCUAUCCCGGUACUCGCUGACAGACGAUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU976133.1
ncRNA:24   CAGUAGCAGACAGUCGCUCAUGGC   1
  ||||||||||*||||=||||||||
targets:429   GUCAUCGUCUAUCAGUGAGUACCG   452

2.5 Zea mays clone 645565 mRNA sequence NA coding protein psRNATarget