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BaseInfo

ncRNA ID novel_zma_miR9133
Species Zea mays
Class miRNA
Genome position Chr1:295789499-295789602 [-]
Reference genome RefGen_v4
Source SRR4237222;SRR5105961
Length 22
Mature sequence(if miRNA) 83 - UAUGCACACCCCAACGUUGACU - 104
Stem-loop(if miRNA) --           C  C    A     --C           GCA  G GAAAA
  UAUGCACACCC AA GUUG CUCCU   UAAAAUGCCCG   GA A     A
  ||||||||||| || |||| |||||   |||||||||||   || |     C
  AUGCGUGUGGG UU CAAC GAGGA   AUUUUACGGGU   CU U     U
AA           A  -    C     AUU           AGA  G AGUGG
Stem-loop sequence UAUGCACACCCCAACGUUGACUCCUCUAAAAUGCCCGGCAGAGAGAAAAACUGGUGAUGUCAGAUGGGCAUUUUAUUAAGGAGCCAACUUAGGGUGUGCGUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI405943.1
ncRNA:22   UCAGUUGCAACCCCACACGUAU   1
  ||||||||||||||||||||||
targets:95   AGUCAACGUUGGGGUGUGCAUA   116

0.0 Sequence 4068 from Patent EP2074227 NA coding protein psRNATarget
LQ238073.1
ncRNA:22   UCAGUUGCAACCCCACACGUAU   1
  ||||||||||||||||||||||
targets:95   AGUCAACGUUGGGGUGUGCAUA   116

0.0 Sequence 4068 from Patent EP2985353 NA coding protein psRNATarget
JB166404.1
ncRNA:22   UCAGUUGCAACCCCACACGUAU   1
  ||||||||||||||||||||||
targets:95   AGUCAACGUUGGGGUGUGCAUA   116

0.0 Sequence 4068 from Patent EP2559767 NA coding protein psRNATarget