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BaseInfo

ncRNA ID novel_zma_miR9111
Species Zea mays
Class miRNA
Genome position Chr1:231271955-231272000 [+]
Reference genome RefGen_v4
Source SRR4237222;SRR4237223;SRR4237224;SRR4237225
Length 22
Mature sequence(if miRNA) 1 - GACCACUUCGUUUGUACGACUG - 22
Stem-loop(if miRNA) --      U     UG   G CU
  GACCAC UCGUU  UAC A  G
  |||||| |||||  ||| |
  UUGGUG AGCGG  GUG U  G
AG      C     GA   G CG
Stem-loop sequence GACCACUUCGUUUGUACGACUGGGCUGGUGAGGGCGACGUGGUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952163.1
ncRNA:22   GUCAGCAUGUUUGCUUCACCAG   1
  ||||*||||||||*||||||||
targets:1387   CAGUGGUACAAACAAAGUGGUC   1408

2.5 Zea mays clone 1213939 mRNA sequence NA coding protein psRNATarget