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BaseInfo

ncRNA ID novel_zma_miR9102
Species Zea mays
Class miRNA
Genome position Chr3:132541266-132541348 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - ACCUGAGACACUCGACAAAGACGU - 24
Stem-loop(if miRNA) --U             C G     CA           C   U
   UUUUUGUCGAGUG U UCAGG  GACACUCGGCA AGG A
   ||||||||||||| | |||||  ||||||||||| ||| A
   AGAAACAGCUCAC A AGUCC  CUGUGAGCCGU UUC C
UGC             - G     -A           U   U
Stem-loop sequence UUUUUUGUCGAGUGCUGUCAGGCAGACACUCGGCACAGGUAACUCUUUUGCCGAGUGUCACCUGAGACACUCGACAAAGACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU971703.1
ncRNA:24   UGCAGAAACAGCUCACAGAGUCCA   1
  ==||-|||||||||||||*||||*
targets:865   GUGU-UUUGUCGAGUGUCGCAGGC   887

2.5 Zea mays clone 369401 calcium binding EF-hand protein mRNA, complete cds NA coding protein psRNATarget
NM_001158203.1
ncRNA:24   UGCAGAAACAGCUCACAGAGUCCA   1
  ==||-|||||||||||||*||||*
targets:865   GUGU-UUUGUCGAGUGUCGCAGGC   887

2.5 Zea mays calcium binding EF-hand protein (LOC100285310), mRNA NA coding protein psRNATarget