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BaseInfo

ncRNA ID novel_zma_miR9095
Species Zea mays
Class miRNA
Genome position Chr10:148905470-148905563 [-]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 1 - AAAGAAACGGAGGGAGUAUAACUU - 24
Stem-loop(if miRNA) --AA                                        CAA
    UAUACUCCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUG   A
    ||||||||||||||||||||||||||||||||||||||||
    AUAUGAGGGAGGCAAAGAAAAAUAAUCAGCGACCUAUCAC   A
UUCA                                        AUU
Stem-loop sequence AAUAUACUCCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCAAAAUUACACUAUCCAGCGACUAAUAAAAAGAAACGGAGGGAGUAUAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008669400.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *|||||||||||||||||||||||
targets:1594   CAGUUAUACUCCCUCCGUUUCUUU   1617

0.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
LQ235499.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||*|||||||||||||||||||||
targets:5   AACUUAUACUCCCUCCGUUUCUUU   28

0.0 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
JB163830.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||*|||||||||||||||||||||
targets:5   AACUUAUACUCCCUCCGUUUCUUU   28

0.0 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
HI403369.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||*|||||||||||||||||||||
targets:5   AACUUAUACUCCCUCCGUUUCUUU   28

0.0 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
EU973473.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||*||=||||||||||||||||||
targets:643   AACUUGUACUCCCUCCGUUUCUUU   666

1.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
EZ061772.1
ncRNA:24   UUC-AAUAUGAGGGAGGCAAAGAAA   1
  *||-|||||||||||||||||||||
targets:177   UAGAUUAUACUCCCUCCGUUUCUUU   201

0.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
XM_020537567.1
ncRNA:24   UUCAAUA-UGAGGGAGGCAAAGAAA   1
  *||||||-|||||||||||||||||
targets:1445   UAGUUAUUACUCCCUCCGUUUCUUU   1469

2.0 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2198   AAUUAUAUACUCCCUCCGUUUCUUU   2222

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2198   AAUUAUAUACUCCCUCCGUUUCUUU   2222

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2198   AAUUAUAUACUCCCUCCGUUUCUUU   2222

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2219   AAUUAUAUACUCCCUCCGUUUCUUU   2243

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2219   AAUUAUAUACUCCCUCCGUUUCUUU   2243

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2219   AAUUAUAUACUCCCUCCGUUUCUUU   2243

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2198   AAUUAUAUACUCCCUCCGUUUCUUU   2222

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2157   AAUUAUAUACUCCCUCCGUUUCUUU   2181

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2212   AAUUAUAUACUCCCUCCGUUUCUUU   2236

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2237   AAUUAUAUACUCCCUCCGUUUCUUU   2261

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2198   AAUUAUAUACUCCCUCCGUUUCUUU   2222

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   UUCA-AUAUGAGGGAGGCAAAGAAA   1
  ||*|-||||||||||||||||||||
targets:2136   AAUUAUAUACUCCCUCCGUUUCUUU   2160

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
LQ239400.1
ncRNA:23   UCAAUAUGAGGGAGGCAAAGAAA   1
  |*||=||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUUU   23

1.0 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
JB167731.1
ncRNA:23   UCAAUAUGAGGGAGGCAAAGAAA   1
  |*||=||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUUU   23

1.0 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
HI407270.1
ncRNA:23   UCAAUAUGAGGGAGGCAAAGAAA   1
  |*||=||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUUU   23

1.0 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   UUCAA--UAUGAGGGAGGCAAAGAAA   1
  |*|||--|||||||||||||||||||
targets:1143   AUGUUGGAUACUCCCUCCGUUUCUUU   1168

2.5 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
JB163748.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||*|*|||||||||||||||||||
targets:5   AAAUGAUACUCCCUCCGUUUCUUU   28

0.0 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
HI403287.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||*|*|||||||||||||||||||
targets:5   AAAUGAUACUCCCUCCGUUUCUUU   28

0.0 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||*|*|||||||||||||||||||
targets:5   AAAUGAUACUCCCUCCGUUUCUUU   28

0.0 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
EU964901.1
ncRNA:24   UUCAAU--AUGAGGGAGGCAAAGAAA   1
  **||||--||||||||||||||||||
targets:489   UUGUUAAGUACUCCCUCCGUUUCUUU   514

2.5 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
EU952378.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  |||*||||||||||||||||*|||
targets:707   AAGAUAUACUCCCUCCGUUUAUUU   730

1.5 Zea mays clone 1278936 mitochondrial import inner membrane translocase subunit TIM14 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   UUCAAU--AUGAGGGAGGCAAAGAAA   1
  **||||--||||||||||||||||||
targets:561   UUGUUAAGUACUCCCUCCGUUUCUUU   586

2.5 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:24   UUCAAU--AUGAGGGAGGCAAAGAAA   1
  **||||--||||||||||||||||||
targets:561   UUGUUAAGUACUCCCUCCGUUUCUUU   586

2.5 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||*|*|||||||||||||||||||
targets:135   AAUUAAUACUCCCUCCGUUUCUUU   158

0.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  |||--|||||||||||||||||||
targets:1539   AAG--AUACUCCCUCCGUUUCUUU   1560

0.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
LQ235529.1
ncRNA:24   UUC-AA-UAUGAGGGAGGCAAAGAAA   1
  *||-||-|||||||||||||||||||
targets:3   CAGAUUCAUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
HI403399.1
ncRNA:24   UUC-AA-UAUGAGGGAGGCAAAGAAA   1
  *||-||-|||||||||||||||||||
targets:3   CAGAUUCAUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
JB163740.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  ||-|||-||||||||||||||||||
targets:5   AA-UUAGUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  ||-|||-||||||||||||||||||
targets:5   AA-UUAGUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
LQ235409.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  ||-|||-||||||||||||||||||
targets:5   AA-UUAGUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
JB163860.1
ncRNA:24   UUC-AA-UAUGAGGGAGGCAAAGAAA   1
  *||-||-|||||||||||||||||||
targets:3   CAGAUUCAUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *|**||||||||||||||||||||
targets:1457   UAUAUAUACUCCCUCCGUUUCUUU   1480

0.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||**||||||=|||||||||||||
targets:1349   AACAUAUACUUCCUCCGUUUCUUU   1372

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||--|||||||||||=||||||||
targets:1996   AA--UAUACUCCCUCUGUUUCUUU   2017

1.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008677351.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  |||--=||||||||||||||||||
targets:2053   AAG--GUACUCCCUCCGUUUCUUU   2074

1.0 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||**||||||=|||||||||||||
targets:2490   AACAUAUACUUCCUCCGUUUCUUU   2513

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
LQ240840.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUU   21

1.0 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
HI408710.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUU   21

1.0 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
JB169171.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUU   21

1.0 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
HI410196.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUU   21

1.0 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
LQ242326.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUU   21

1.0 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
JB170657.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUU   21

1.0 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   UU-CAAUA-UGAGGGAGGCAAAGAAA   1
  ||-|*|||-|||||||||||||||||
targets:2788   AAUGCUAUUACUCCCUCCGUUUCUUU   2813

2.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   UU-CAAUA-UGAGGGAGGCAAAGAAA   1
  ||-|*|||-|||||||||||||||||
targets:2805   AAUGCUAUUACUCCCUCCGUUUCUUU   2830

2.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   UU-CAAUA-UGAGGGAGGCAAAGAAA   1
  ||-|*|||-|||||||||||||||||
targets:2911   AAUGCUAUUACUCCCUCCGUUUCUUU   2936

2.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669143.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *|*|||||||||*|||||||||||
targets:2735   UACUUAUACUCCAUCCGUUUCUUU   2758

1.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008669142.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *|*|||||||||*|||||||||||
targets:2665   UACUUAUACUCCAUCCGUUUCUUU   2688

1.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008669138.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *|*|||||||||*|||||||||||
targets:2797   UACUUAUACUCCAUCCGUUUCUUU   2820

1.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   UU-CAAUA-UGAGGGAGGCAAAGAAA   1
  ||-|*|||-|||||||||||||||||
targets:3690   AAUGCUAUUACUCCCUCCGUUUCUUU   3715

2.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547479.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *|*|||||||||*|||||||||||
targets:3175   UACUUAUACUCCAUCCGUUUCUUU   3198

1.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547478.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *|*|||||||||*|||||||||||
targets:3175   UACUUAUACUCCAUCCGUUUCUUU   3198

1.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ***|*|||||||||||||||||||
targets:1282   CUCUAAUACUCCCUCCGUUUCUUU   1305

0.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ***|*|||||||||||||||||||
targets:1282   CUCUAAUACUCCCUCCGUUUCUUU   1305

0.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
LQ241458.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  **|||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUU   21

0.0 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  **|||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUU   21

0.0 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  **|||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUU   21

0.0 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
JB163817.1
ncRNA:24   UUCAA-UAUGAGGGAGGCAAAGAAA   1
  ***||-=||||||||||||||||||
targets:4   UUCUUCGUACUCCCUCCGUUUCUUU   28

3.0 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
HI403356.1
ncRNA:24   UUCAA-UAUGAGGGAGGCAAAGAAA   1
  ***||-=||||||||||||||||||
targets:4   UUCUUCGUACUCCCUCCGUUUCUUU   28

3.0 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
LQ235486.1
ncRNA:24   UUCAA-UAUGAGGGAGGCAAAGAAA   1
  ***||-=||||||||||||||||||
targets:4   UUCUUCGUACUCCCUCCGUUUCUUU   28

3.0 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
BT060817.2
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *|***|||||||||||||||||||
targets:224   UACCAAUACUCCCUCCGUUUCUUU   247

0.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
BT062074.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:1130   ACGCUACUACUCCCUCCGUUUCUUU   1154

2.0 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
EU968044.1
ncRNA:24   UUCA---AUAUGAGGGAGGCAAAG-AAA   1
  |*||---|||||||||||||||||-|||
targets:1015   AUGUAUAUAUACUCCCUCCGUUUCGUUU   1042

3.0 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   UUCA---AUAUGAGGGAGGCAAAG-AAA   1
  |*||---|||||||||||||||||-|||
targets:903   AUGUAUAUAUACUCCCUCCGUUUCGUUU   930

3.0 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:1213   ACGCUACUACUCCCUCCGUUUCUUU   1237

2.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:1228   ACGCUACUACUCCCUCCGUUUCUUU   1252

2.0 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:1242   ACGCUACUACUCCCUCCGUUUCUUU   1266

2.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:1294   ACGCUACUACUCCCUCCGUUUCUUU   1318

2.0 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:1296   ACGCUACUACUCCCUCCGUUUCUUU   1320

2.0 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
BT054612.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  **||*=||||||=|||||||||||
targets:1358   CUGUAGUACUCCUUCCGUUUCUUU   1381

2.5 Zea mays full-length cDNA clone ZM_BFc0190P19 mRNA, complete cds NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:1402   ACGCUACUACUCCCUCCGUUUCUUU   1426

2.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  ||**||-||||||||||||||||||
targets:1970   AAUAUACUACUCCCUCCGUUUCUUU   1994

2.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:1991   ACGCUACUACUCCCUCCGUUUCUUU   2015

2.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:2022   ACGCUACUACUCCCUCCGUUUCUUU   2046

2.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  ||**||-||||||||||||||||||
targets:2037   AAUAUACUACUCCCUCCGUUUCUUU   2061

2.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:2104   ACGCUACUACUCCCUCCGUUUCUUU   2128

2.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   UUCAAU-AUGAGGGAGGCAAAGAAA   1
  |*|*||-||||||||||||||||||
targets:2135   ACGCUACUACUCCCUCCGUUUCUUU   2159

2.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
HI410015.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=|||||||||=||||||||
targets:1   AUGUACUCCCUCUGUUUCUUU   21

2.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
JB170476.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=|||||||||=||||||||
targets:1   AUGUACUCCCUCUGUUUCUUU   21

2.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
LQ242145.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  *|=|||||||||=||||||||
targets:1   AUGUACUCCCUCUGUUUCUUU   21

2.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
JB163862.1
ncRNA:24   UUCA-AUA-UGAGGGAGGCAAAGAAA   1
  =|*|-|||-|||||||||||||||||
targets:3   GAUUGUAUUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
LQ235531.1
ncRNA:24   UUCA-AUA-UGAGGGAGGCAAAGAAA   1
  =|*|-|||-|||||||||||||||||
targets:3   GAUUGUAUUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
HI403401.1
ncRNA:24   UUCA-AUA-UGAGGGAGGCAAAGAAA   1
  =|*|-|||-|||||||||||||||||
targets:3   GAUUGUAUUACUCCCUCCGUUUCUUU   28

2.0 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
EU970288.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  *=**|=||||||||=|||||||||
targets:1325   UGCAUGUACUCCCUUCGUUUCUUU   1348

2.5 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
HI408570.1
ncRNA:20   AU-AUGAGGGAGGCAAAGAAA   1
  ||-||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUU   21

2.0 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
LQ240700.1
ncRNA:20   AU-AUGAGGGAGGCAAAGAAA   1
  ||-||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUU   21

2.0 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
JB169031.1
ncRNA:20   AU-AUGAGGGAGGCAAAGAAA   1
  ||-||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUU   21

2.0 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
JB167766.1
ncRNA:23   UCAAUAUGAGGGAGGCAAAG-AAA   1
  |**|||||||||||||||||-|||
targets:1   AUAUAUACUCCCUCCGUUUCGUUU   24

3.0 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
HI407305.1
ncRNA:23   UCAAUAUGAGGGAGGCAAAG-AAA   1
  |**|||||||||||||||||-|||
targets:1   AUAUAUACUCCCUCCGUUUCGUUU   24

3.0 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
LQ239435.1
ncRNA:23   UCAAUAUGAGGGAGGCAAAG-AAA   1
  |**|||||||||||||||||-|||
targets:1   AUAUAUACUCCCUCCGUUUCGUUU   24

3.0 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
HI409599.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  |*||||||=||||||||||||
targets:1   UCAUACUCUCUCCGUUUCUUU   21

1.5 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
LQ241729.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  |*||||||=||||||||||||
targets:1   UCAUACUCUCUCCGUUUCUUU   21

1.5 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
JB170060.1
ncRNA:21   AAUAUGAGGGAGGCAAAGAAA   1
  |*||||||=||||||||||||
targets:1   UCAUACUCUCUCCGUUUCUUU   21

1.5 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
HI403267.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||---|||=|||||||||||||||
targets:97   AA---AUAUUCCCUCCGUUUCUUU   117

1.0 Sequence 1392 from Patent EP2074227 NA coding protein psRNATarget
JB163728.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||---|||=|||||||||||||||
targets:97   AA---AUAUUCCCUCCGUUUCUUU   117

1.0 Sequence 1392 from Patent EP2559767 NA coding protein psRNATarget
LQ235397.1
ncRNA:24   UUCAAUAUGAGGGAGGCAAAGAAA   1
  ||---|||=|||||||||||||||
targets:97   AA---AUAUUCCCUCCGUUUCUUU   117

1.0 Sequence 1392 from Patent EP2985353 NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   UUCAAUA-UGAGGGAGGCAAAGAAA   1
  ****|||-|||||||||||||||||
targets:1159   UUCAUAUUACUCCCUCCGUUUCUUU   1183

2.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   UUCAAUA-UGAGGGAGGCAAAGAAA   1
  ****|||-|||||||||||||||||
targets:1265   UUCAUAUUACUCCCUCCGUUUCUUU   1289

2.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:24   UUCAAU--AUGAGGGAGGCAAAGAAA   1
  **||*|--||||||||||||||||||
targets:182   UUGUCACGUACUCCCUCCGUUUCUUU   207

2.5 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
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