ncRNA ID | novel_zma_miR9089 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:123774481-123774587 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237222 |
Length | 24 |
Mature sequence(if miRNA) | 84 - AUUAGUUAGAGAGAGCCCAGAGCU - 107 |
Stem-loop(if miRNA) |
--      U  A AG       A   -   AA    AUA   A   AU         U   AUUAGU AG G  AGCCCAG GCU CUA  UACU   UCU UCU  CUAUAUAUA A   |||||| || |  ||||||| ||| |||  ||||   ||| |||  |||||||||   UAAUCA UC C  UCGGGUC CGA GGU  AUGG   AGA AGG  GAUAUAUAU U GG      -  C CU       C   A   -A    ---   -   --         A |
Stem-loop sequence | AUUAGUUAGAGAGAGCCCAGAGCUCUAAAUACUAUAUCUAUCUAUCUAUAUAUAUAUAUAUAUAUAGGGAAGAGGUAAUGGAAGCCCUGGGCUUCCCCUACUAAUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020541004.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC109940773 (LOC109940773), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020541002.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC109940773 (LOC109940773), transcript variant X1, mRNA | NA | coding protein | psRNATarget |