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BaseInfo

ncRNA ID novel_zma_miR9088
Species Zea mays
Class miRNA
Genome position Chr9:124621915-124622001 [-]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 64 - CCCAUGGGGGUCCGGACUUACUGU - 87
Stem-loop(if miRNA) --  -      - -       CUUA      -A     --U    UAU
  CC CAUGGG G GUCCGGA    CUGUUG  UGUCU   GGAG   A
  || |||||| | |||||||    ||||||  |||||   ||||
  GG GUACCC C CAGGCCU    GGCGGU  ACAGG   CUUC   U
GU  U      A U       ---C      GC     UCU    CAC
Stem-loop sequence CCCAUGGGGGUCCGGACUUACUGUUGAUGUCUUGGAGUAUAUCACCUUCUCUGGACACGUGGCGGCUCCGGACUCACCCAUGUGGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242059.1
ncRNA:24   UGUCAUUCAGGCCUGGGGGUACCC   1
  *||||=||||||||||||*|||||
targets:58   CCAGUGAGUCCGGACCCCAAUGGG   81

2.5 Sequence 8054 from Patent EP2985353 NA coding protein psRNATarget
HI409929.1
ncRNA:24   UGUCAUUCAGGCCUGGGGGUACCC   1
  *||||=||||||||||||*|||||
targets:58   CCAGUGAGUCCGGACCCCAAUGGG   81

2.5 Sequence 8054 from Patent EP2074227 NA coding protein psRNATarget
JB170390.1
ncRNA:24   UGUCAUUCAGGCCUGGGGGUACCC   1
  *||||=||||||||||||*|||||
targets:58   CCAGUGAGUCCGGACCCCAAUGGG   81

2.5 Sequence 8054 from Patent EP2559767 NA coding protein psRNATarget