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BaseInfo

ncRNA ID osa-miRf10505-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UUUGGCCAGCCGGAUGGCUUGGC - NA
Stem-loop(if miRNA) U  U              U             UG  CAG G
 GU UGGCUAGGCCAUUU GGCUGGCCAAAGU  GC   C U
 || |||||||||||||| |||||||||||||  ||   |
 CA AUCGGUUCGGUAGG CCGACCGGUUUCG  UG   G G
G  U              -             --  -AA A
Stem-loop sequence UGUUUGGCUAGGCCAUUUUGGCUGGCCAAAGUUGGCCAGCGUGAGAAGUGCUUUGGCCAGCCGGAUGGCUUGGCUAUACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015769884.1
ncRNA:23   CGGUUCGGUAGGCCGACCGGUUU   1
  *||||||||||||||||||=|||
targets:9   UCCAAGCCAUCCGGCUGGCUAAA   31

1.5 PREDICTED: Oryza sativa Japonica Group BTB/POZ and MATH domain-containing protein 1 (LOC4330803), mRNA BTB/POZ and MATH domain-containing protein 1(LOC4330803) coding protein psRNATarget
AK288675.1
ncRNA:23   CGGUUCGGUAGGCCGACCGGUUU   1
  ||||||||||||||||*||||||
targets:2048   GCCAAGCCAUCCGGCUAGCCAAA   2070

1.5 Oryza sativa Japonica Group cDNA, clone: J090059E06, full insert sequence NA coding protein psRNATarget