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BaseInfo

ncRNA ID novel_zma_miR9077
Species Zea mays
Class miRNA
Genome position Chr8:100961354-100961426 [+]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 50 - ACAGGCUGUGGCGCCGAGCUUCGG - 73
Stem-loop(if miRNA) --                AG             CUG
  GAAGCUCGGCGCCACA  CUGUGGCGCCGAG   U
  ||||||||||||||||  |||||||||||||   G
  CUUCGAGCCGCGGUGU  GACACCGCGGCUC   U
GG                CG             CAU
Stem-loop sequence GAAGCUCGGCGCCACAAGCUGUGGCGCCGAGCUGUGUUACCUCGGCGCCACAGGCUGUGGCGCCGAGCUUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI405915.1
ncRNA:24   GGCUUCGAGCCGCGGUGUCGGACA   1
  *||||||||||||||||||*||||
targets:55   ACGAAGCUCGGCGCCACAGGCUGU   78

1.5 Sequence 4040 from Patent EP2074227 NA coding protein psRNATarget
JB166376.1
ncRNA:24   GGCUUCGAGCCGCGGUGUCGGACA   1
  *||||||||||||||||||*||||
targets:55   ACGAAGCUCGGCGCCACAGGCUGU   78

1.5 Sequence 4040 from Patent EP2559767 NA coding protein psRNATarget
LQ238045.1
ncRNA:24   GGCUUCGAGCCGCGGUGUCGGACA   1
  *||||||||||||||||||*||||
targets:55   ACGAAGCUCGGCGCCACAGGCUGU   78

1.5 Sequence 4040 from Patent EP2985353 NA coding protein psRNATarget