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BaseInfo

ncRNA ID osa-miRf10504-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GAUACCUCGUUGGUGUCAUG - NA
Stem-loop(if miRNA)         C UC       UA              CUUAAUU   U     AAGGUAUAAUGAUACUUUUAUGGUAU
UGAUACCU C  GGCACCA  GAGGUAUCAUAAUA       GAU CCAUG                          C
|||||||| |  |||||||  ||||||||||||||       ||| |||||                          U
AUUAUGGA G  CUGUGGU  CUCCAUAGUGUUAU       ACU CAUAG                          U
        A UA       UG              ----UUA   A     UGGCUAUGAAGUACCAAAAUAACAUC
Stem-loop sequence UGAUACCUCCUCGGCACCAUAGAGGUAUCAUAAUACUUAAUUGAUUCCAUGAAGGUAUAAUGAUACUUUUAUGGUAUCUUCUACAAUAAAACCAUGAAGUAUCGGUGAUACAUCAAUUUAUUGUGAUACCUCGUUGGUGUCAUGAAGGUAUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015780629.1
ncRNA:20   GUACUGUGGUUGCUCCAUAG   1
  =||||*||||||||||||||
targets:1208   UAUGAAACCAACGAGGUAUC   1227

1.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA1 (LOC9267606), transcript variant X2, mRNA putative disease resistance protein RGA1(LOC9267606) coding protein psRNATarget
XM_015780628.1
ncRNA:20   GUACUGUGGUUGCUCCAUAG   1
  =||||*||||||||||||||
targets:1211   UAUGAAACCAACGAGGUAUC   1230

1.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA1 (LOC9267606), transcript variant X1, mRNA putative disease resistance protein RGA1(LOC9267606) coding protein psRNATarget