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BaseInfo

ncRNA ID	novel_zma_miR9068
Species	Zea mays
Class	miRNA
Genome position	Chr8:44558837-44558896 [+]
Reference genome	RefGen_v4
Source	SRR4237222
Length	23
Mature sequence(if miRNA)	1 - CUCGGCACCAUAGGCUAUGGCGC - 23
Stem-loop(if miRNA)	--      A       CUA     C    C   CUCGGC CCAUAGG   UGGCG CGAG U   |||||| |||||||   ||||| ||||   GAGCCG GGUAUCC   ACCGC GCUC A AU      C       AAC     A    U
Stem-loop sequence	CUCGGCACCAUAGGCUAUGGCGCCGAGCUAUCUCGACGCCACAACCUAUGGCGCCGAGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654031.2	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||=||||||||||||||| targets:1337   GCGCCAUGGCCUAUGGUGCCGAG   1359 Target Full Sequence	1.0	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666663.2	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   ||||||||||||||||*|||||| targets:870   GCGCCAUAGCCUAUGGCGCCGAG   892 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103643463), mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   ||||||||||||||||*|||||| targets:1310   GCGCCAUAGCCUAUGGCGCCGAG   1332 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||||*||||||*|||||| targets:48   GCGCCAUAGGCUAUGGCGCCGAG   70 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   ||||||||||||||||*|||||| targets:1308   GCGCCAUAGCCUAUGGCGCCGAG   1330 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||||*||||||*|||||| targets:46   GCGCCAUAGGCUAUGGCGCCGAG   68 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   ||||||||||||||||*|||||| targets:1367   GCGCCAUAGCCUAUGGCGCCGAG   1389 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||||*||||||*|||||| targets:106   GCGCCAUAGGCUAUGGCGCCGAG   128 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   ||||||||||||||||*|||||| targets:1367   GCGCCAUAGCCUAUGGCGCCGAG   1389 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||||*||||||*|||||| targets:106   GCGCCAUAGGCUAUGGCGCCGAG   128 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT034188.1	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||||*||||||*|||||| targets:650   GCGCCAUAGGCUAUGGCGCCGAG   672 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0029I19 mRNA, complete cds	NA	coding protein	psRNATarget
BT034188.1	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||||*||||||*|||||| targets:686   GCGCCAUAGGCUAUGGCGCCGAG   708 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0029I19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137355.1	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||||*||||||*|||||| targets:650   GCGCCAUAGGCUAUGGCGCCGAG   672 Target Full Sequence	2.5	Zea mays SAUR56-auxin-responsive SAUR family member (LOC100191931), mRNA	NA	coding protein	psRNATarget
NM_001137355.1	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   |||||||||*||||||*|||||| targets:686   GCGCCAUAGGCUAUGGCGCCGAG   708 Target Full Sequence	2.5	Zea mays SAUR56-auxin-responsive SAUR family member (LOC100191931), mRNA	NA	coding protein	psRNATarget
XM_008649330.2	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   ||||||*|||||||||*|||||| targets:13   GCGCCACAGCCUAUGGCGCCGAG   35 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100273460 (LOC100273460), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008649328.2	ncRNA:23   CGCGGUAUCGGAUACCACGGCUC   1   ||||||*|||||||||*|||||| targets:11   GCGCCACAGCCUAUGGCGCCGAG   33 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100273460 (LOC100273460), transcript variant X1, mRNA	NA	coding protein	psRNATarget