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BaseInfo

ncRNA ID novel_zma_miR9057
Species Zea mays
Class miRNA
Genome position Chr7:131303098-131303150 [+]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 30 - ACACUCGGUAAAGAAACUCUUUGC - 53
Stem-loop(if miRNA) --      --               AA
  AAAGGG  UCUUUGCCGAGUGUC  A
  ||||||  |||||||||||||||  A
  UUUCUC  AGAAAUGGCUCACAG  A
CG      AA               AA
Stem-loop sequence AAAGGGUCUUUGCCGAGUGUCAAAAAAAGACACUCGGUAAAGAAACUCUUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658185.2
ncRNA:24   CGUUUCUCAAAGAAAUGGCUCACA   1
  |=||||||*||*||||||||||||
targets:1666   GUAAAGAGCUUGUUUACCGAGUGU   1689

2.5 PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA NA coding protein psRNATarget