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BaseInfo

ncRNA ID novel_zma_miR9054
Species Zea mays
Class miRNA
Genome position Chr7:118787854-118787932 [+]
Reference genome RefGen_v4
Source SRR4237222
Length 21
Mature sequence(if miRNA) 1 - UAGAGGCGGUUCUUUAUGAAA - 21
Stem-loop(if miRNA) --  G             U           GA       
  UA AGGCGGUUCUUUA GAAAACCGCCA  AGAAAUCC
  || ||||||||||||| |||||||||||  |||||||A
  AU UCCGCCAAGGAAU CUUUUGGCGGU  UCUUUAGU
AG  G             C           GA       
Stem-loop sequence UAGAGGCGGUUCUUUAUGAAAACCGCCAGAAGAAAUCCAUGAUUUCUAGUGGCGGUUUUCCUAAGGAACCGCCUGUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403026.1
ncRNA:21   AAAGUAUUUCUUGGCGGAGAU   1
  ||||*||||||||||||*|||
targets:25   UUUCUUAAAGAACCGCCACUA   45

2.5 Sequence 1151 from Patent EP2074227 NA coding protein psRNATarget
JB163487.1
ncRNA:21   AAAGUAUUUCUUGGCGGAGAU   1
  ||||*||||||||||||*|||
targets:25   UUUCUUAAAGAACCGCCACUA   45

2.5 Sequence 1151 from Patent EP2559767 NA coding protein psRNATarget
LQ235156.1
ncRNA:21   AAAGUAUUUCUUGGCGGAGAU   1
  ||||*||||||||||||*|||
targets:25   UUUCUUAAAGAACCGCCACUA   45

2.5 Sequence 1151 from Patent EP2985353 NA coding protein psRNATarget