Search result

BaseInfo

ncRNA ID	novel_zma_miR9051
Species	Zea mays
Class	miRNA
Genome position	Chr7:100534776-100534860 [+]
Reference genome	RefGen_v4
Source	SRR4237222;SRR4237223;SRR4237224;SRR4237225
Length	24
Mature sequence(if miRNA)	1 - AAUAUCUGAAGCCCAGGGCUCCCG - 24
Stem-loop(if miRNA)	---AA   CU                         A  C   A      UAU  GAAGCCCAGGGCUCCCGUUAUACCU CC UAU U      |||  ||||||||||||||||||||||||| || |||      AUA  CUUCGGGUCCCGAGGGCAAUAUGGA GG AUA A AAUUG   AC                         C  U   U
Stem-loop sequence	AAUAUCUGAAGCCCAGGGCUCCCGUUAUACCUACCCUAUAUAUAUAUGGCAGGUAUAACGGGAGCCCUGGGCUUCCAAUAGUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550476.1	ncRNA:24   GCCCUCGGGACCCGAAGUCUAUAA   1   |||||||||||||||||=|||||| targets:1   CGGGAGCCCUGGGCUUCGGAUAUU   24 Target Full Sequence	1.5	PREDICTED: Zea mays protein FAR-RED IMPAIRED RESPONSE 1-like (LOC103651206), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020550477.1	ncRNA:24   GCCCUCGGGACCCGAAGUCUAUAA   1   |||||||||||||||||=|||||| targets:1   CGGGAGCCCUGGGCUUCGGAUAUU   24 Target Full Sequence	1.5	PREDICTED: Zea mays protein FAR-RED IMPAIRED RESPONSE 1-like (LOC103651206), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008680942.2	ncRNA:24   GCCCUCGGGACCCGAAGUCUAUAA   1   |||||||||||||||||=|||||| targets:2332   CGGGAGCCCUGGGCUUCGGAUAUU   2355 Target Full Sequence	1.5	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 1-like (LOC103654119), mRNA	NA	coding protein	psRNATarget
XM_008652071.1	ncRNA:24   GCCCUCGGGACCCGAAGUCUAUAA   1   =******|=||||||||||||||| targets:46   UACCCAACUUGGGCUUCAGAUAUU   69 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103631064 (LOC103631064), mRNA	NA	coding protein	psRNATarget
XM_008659724.1	ncRNA:24   GCCCUCGGGACCCGAAGUCUAUAA   1   =******|=||||||||||||||| targets:46   UACCCAACUUGGGCUUCAGAUAUU   69 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103637561 (LOC103637561), mRNA	NA	coding protein	psRNATarget