ncRNA ID | novel_zma_miR9044 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:177821807-177821933 [-] |
Reference genome | RefGen_v4 |
Source | SRR1997865;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACCAGACUGUCAGGUGUGCACCGG - 24 |
Stem-loop(if miRNA) |
--    UG    A    U   C    ---------    AACG  C   CG     A  -   GG      A   GGUG  CACC GACA GUC GGUG         AGCC    GU GGC  GGCCA CG GUC  CCGCGC A   ||||  |||| |||| ||| ||||         ||||    || |||  ||||| || |||  |||||| U   CCAC  GUGG CUGU CAG CCAC         UCGG    CA CCG  CCGGU GC CAG  GGCGCG C GG    GU    A    -   A    GGAAGAAGA    ----  A   AG     -  A   --      U |
Stem-loop sequence | GGUGUGCACCAGACAUGUCCGGUGAGCCAACGGUCGGCCGGGCCAACGGUCGGCCGCGCAAUCUGCGCGGGACACGUGGCCGAGCCAACGGCUAGAAGAAGGCACCAGACUGUCAGGUGUGCACCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU940974.1 |
|
1.5 | Zea mays clone 1225259 mRNA sequence | NA | coding protein | psRNATarget |