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BaseInfo

ncRNA ID osa-miRf10501-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AUCCUUUGAAUCAAAGGGCC - NA
Stem-loop(if miRNA)                                       AAAUUUCC      ----  UUGAAUCCUAUGAAAU
GAAAGCUUCAAUCCUUUGAAUCAAAGGGCCAAAUAGGA        UAUAGG    AU                U
||||||||||||||||||||||||||||||||||||||        ||||||    ||                C
CUUUCGAAGUUAGGAAACUUAGUUUCCCGGUUUAUUUU        AAGGGU    UU                C
                                      --------      AAAC  AGUUUCCUAAAUACAU
Stem-loop sequence GAAAGCUUCAAUCCUUUGAAUCAAAGGGCCAAAUAGGAAAAUUUCCUAUAGGAUUUGAAUCCUAUGAAAUUCCUACAUAAAUCCUUUGAUUCAAAUGGGAAUUUUAUUUGGCCCUUUGAUUCAAAGGAUUGAAGCUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015773244.1
ncRNA:20   CCG-GGAAACUAAGUUUCCUA   1
  |||-|||||||||||||||||
targets:207   GGCUCCUUUGAUUCAAAGGAU   227

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333552 (LOC4333552), mRNA uncharacterized LOC4333552(LOC4333552) coding protein psRNATarget
AK288502.1
ncRNA:20   CCGGGAAACUAAGUUUCCUA   1
  *|||||||||*||||||||*
targets:805   AGCCCUUUGAAUCAAAGGAA   824

2.5 Oryza sativa Japonica Group cDNA, clone: J090041D12, full insert sequence NA coding protein psRNATarget
CT837837.1
ncRNA:20   CCGGGAAACUAAGUUUCCUA   1
  *|||||||||*||||||||*
targets:1104   AGCCCUUUGAAUCAAAGGAA   1123

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129N04, full insert sequence NA coding protein psRNATarget
XM_015775044.1
ncRNA:20   CCGGGAAACUAAGUUUCCUA   1
  *|||||||||||||*||||*
targets:484   UGCCCUUUGAUUCAUAGGAA   503

2.5 PREDICTED: Oryza sativa Japonica Group two pore potassium channel a (LOC4334137), transcript variant X3, mRNA two pore potassium channel a(LOC4334137) coding protein psRNATarget
XM_015775042.1
ncRNA:20   CCGGGAAACUAAGUUUCCUA   1
  *|||||||||||||*||||*
targets:484   UGCCCUUUGAUUCAUAGGAA   503

2.5 PREDICTED: Oryza sativa Japonica Group two pore potassium channel a (LOC4334137), transcript variant X1, mRNA two pore potassium channel a(LOC4334137) coding protein psRNATarget