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BaseInfo

ncRNA ID	novel_zma_miR9039
Species	Zea mays
Class	miRNA
Genome position	Chr10:134733466-134733591 [+]
Reference genome	RefGen_v4
Source	SRR4237222
Length	24
Mature sequence(if miRNA)	103 - UUGGGGUAGAACCGAACAUGGCCU - 126
Stem-loop(if miRNA)	--   -         -AU UU         C      -      A UG  -----AC    UG   G   GCU UGUUCGGUU   U  CAAUCCAUA GGAUUG GAGGGG U  AU       GGAU  GAG G   ||| |||||||||   |  ||||||||| |||||| |||||| |  ||       ||||  |||   CGG ACAAGCCAA   G  GUUAGGUAU CCUAAC CUCCCU A  UA       UUUA  UUU G UC   U         GAU GG         A      U      A GU  GGGAUCA    GU   A
Stem-loop sequence	GCUUGUUCGGUUAUUUUCAAUCCAUACGGAUUGGAGGGGAUUGAUACGGAUUGGAGGGGAUUUUGAUUUACUAGGGAUUGAAUCCCUCUCAAUCCAUAUGGAUUGGGGUAGAACCGAACAUGGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008658561.2	ncRNA:24   UCCGGUACAAGCCAAGAUGGGGUU   1   |||=||||||||||||||||=||| targets:209   AGGUCAUGUUCGGUUCUACCUCAA   232 Target Full Sequence	1.5	PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase 2 (LOC103636208), mRNA	NA	coding protein	psRNATarget
EZ081763.1	ncRNA:24   UCCGGUACAAGCCAAGAUGGGGUU   1   |||=||||||||||||||||*||| targets:43   AGGUCAUGUUCGGUUCUACCACAA   66 Target Full Sequence	1.5	TSA: Zea mays contig17404, mRNA sequence	NA	coding protein	psRNATarget
EZ068230.1	ncRNA:24   UCCGGUACAAGCCAAGAUGGGGUU   1   |**|=|||||||||||||*||||| targets:28   ACACUAUGUUCGGUUCUAGCCCAA   51 Target Full Sequence	1.5	TSA: Zea mays contig03865, mRNA sequence	NA	coding protein	psRNATarget