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BaseInfo

ncRNA ID	novel_zma_miR9035
Species	Zea mays
Class	miRNA
Genome position	Chr7:165930871-165930980 [+]
Reference genome	RefGen_v4
Source	SRR4237222
Length	24
Mature sequence(if miRNA)	1 - AGGUCUGUUUGGUUUGAUGCCUAA - 24
Stem-loop(if miRNA)	--   U            A  C    CUAUUC   CUAAGAUUAGUUUUUCAAUUCGA   AGG CUGUUUGGUUUG UG CUAA      UGU                       A   ||| |||||||||||| || ||||      |||   UCC GACAAACCAAGC AC GAUU      CAC                       C UG   -            -  C    ----UA   AGUGUGAAACGGAUUCCAAUCAG
Stem-loop sequence	AGGUCUGUUUGGUUUGAUGCCUAACUAUUCUGUCUAAGAUUAGUUUUUCAAUUCGAACGACUAACCUUAGGCAAAGUGUGACACAUUUAGCCACGAACCAAACAGCCUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008681615.2	ncRNA:24   AAUCCGUAGUUUGGUUUGUCUGGA   1   ||||*||||||||||||||||||* targets:1778   UUAGUCAUCAAACCAAACAGACCC   1801 Target Full Sequence	1.0	PREDICTED: Zea mays cytokinin dehydrogenase 7 (LOC103654801), mRNA	NA	coding protein	psRNATarget
XM_020541969.1	ncRNA:24   AAUCCGUAGUUUGGUUUGUCUGGA   1   ||||*||||||||||||||||||* targets:1256   UUAGUCAUCAAACCAAACAGACCC   1279 Target Full Sequence	1.0	PREDICTED: Zea mays RING/U-box superfamily protein (AY109699), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT065537.2	ncRNA:24   AAUCCGUAGUUUGGUUUGUCUGGA   1   |||||||*==|||||||||||||| targets:183   UUAGGCAGUGAACCAAACAGACCU   206 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0224M19 mRNA, complete cds	NA	coding protein	psRNATarget
EU964450.1	ncRNA:24   AAUCCGUAGUUUGGUUUGUCUGGA   1   |||*|||||||||||||||*|||| targets:1117   UUAUGCAUCAAACCAAACAUACCU   1140 Target Full Sequence	1.5	Zea mays clone 278961 pectinesterase inhibitor domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
EZ052567.1	ncRNA:24   AAUCCGUAGUUUGGUUUGUCUGGA   1   |||*|||*||||||||||||=||| targets:575   UUAUGCAGCAAACCAAACAGGCCU   598 Target Full Sequence	2.5	TSA: Zea mays contig53688, mRNA sequence	NA	coding protein	psRNATarget
EZ064297.1	ncRNA:24   AAUCCGUAGUUUGGUUUGUCUGGA   1   ||=**|||*|||||||||=||||| targets:124   UUGUUCAUGAAACCAAACGGACCU   147 Target Full Sequence	2.5	TSA: Zea mays contig65420, mRNA sequence	NA	coding protein	psRNATarget