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BaseInfo

ncRNA ID	ath-miRf10098-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UGGUGUCGAUCGACACCCAAGU - NA
Stem-loop(if miRNA)	-C  CA                  GUUAC  U   CG  UCUGUUUUUCCUUUGUCGAGUGGAA GAUCGAUA  AC  GGGUGUCGAUCGACACCA     UC UGA  CC                         U ||||||||  ||  ||||||||||||||||||     || |||  || CUAGCUGU  UG  CCCACAGCUAGCUGUGGU     AG ACU  UC                         U         CC  AA                  -----  U   UA  AAAGGAGGAGGAGGCGUUUUAACAG
Stem-loop sequence	GAUCGAUACACCAGGGUGUCGAUCGACACCAGUUACUCUUGACGCCUCUGUUUUUCCUUUGUCGAGUGGAAUUGACAAUUUUGCGGAGGAGGAGGAAACUAUUCAUGAUGGUGUCGAUCGACACCCAAGUCCUGUCGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069810.1	ncRNA:22   UGAACCCACAGCUAGCUGUGGU   1   ||*||||||||||||||||||| targets:331   ACCUGGGUGUCGAUCGACACCA   352 Target Full Sequence	0.0	Arabidopsis thaliana At2g13270 mRNA, partial sequence	NA	coding protein	psRNATarget
DQ069800.1	ncRNA:22   UGAACCCACAGCUAGCUGUGGU   1   ||*||||||||||*|||||||| targets:1960   ACGUGGGUGUCGAACGACACCA   1981 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g10070) mRNA, complete cds	NA	coding protein	psRNATarget
EF183308.1	ncRNA:22   UGAACCCACAGCUAGCUGUGGU   1   ||**|*|||||||||||||||| targets:1237   ACCAGAGUGUCGAUCGACACCA   1258 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183309.1	ncRNA:22   UGAACCCACAGCUAGCUGUGGU   1   ||**|*|||||||||||||||| targets:1329   ACCAGAGUGUCGAUCGACACCA   1350 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence	NA	coding protein	psRNATarget
JA894865.1	ncRNA:22   UGA-ACCCACAGCUAGCUGUGGU   1   |||-|*||||||||||||||||| targets:78   ACUCUUGGUGUCGAUCGACACCA   100 Target Full Sequence	3.0	Sequence 182 from Patent WO2011067745	NA	coding protein	psRNATarget
EF183308.1	ncRNA:22   UGAACCCACAGCUAGCUGUGGU   1   |=***|||*||||||||||||| targets:1258   AUCAUGGUAUCGAUCGACACCA   1279 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183309.1	ncRNA:22   UGAACCCACAGCUAGCUGUGGU   1   |=***|||*||||||||||||| targets:1350   AUCAUGGUAUCGAUCGACACCA   1371 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence	NA	coding protein	psRNATarget