Search result

BaseInfo

ncRNA ID	novel_zma_miR9025
Species	Zea mays
Class	miRNA
Genome position	Chr10:119496546-119496602 [+]
Reference genome	RefGen_v4
Source	SRR4237222;SRR5100248;SRR5100255;SRR5105961
Length	24
Mature sequence(if miRNA)	34 - ACGUGAAUUACUGAUCCUGGCACA - 57
Stem-loop(if miRNA)	--     U   G   C         AUC   UGCUA GAU AGU AUUUAUGUA   G   ||||| ||| ||| |||||||||   C   ACGGU CUA UCA UAAGUGCAU   U AC     C   G   U         GUG
Stem-loop sequence	UGCUAUGAUGAGUCAUUUAUGUAAUCGCUGUGUACGUGAAUUACUGAUCCUGGCACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ050603.1	ncRNA:24   ACACGGUCCUAGUCAUUAAGUGCA   1   *|||||||||||||*||||||||| targets:11   CGUGCCAGGAUCAGCAAUUCACGU   34 Target Full Sequence	1.5	TSA: Zea mays contig51723, mRNA sequence	NA	coding protein	psRNATarget
XM_020550893.1	ncRNA:24   ACACGGUCCUAGUCAUUAAGUGCA   1   *||||||||||||||*|||||||| targets:514   CGUGCCAGGAUCAGUUAUUCACGU   537 Target Full Sequence	1.5	PREDICTED: Zea mays diacylglycerol O-acyltransferase 2D-like (LOC103650530), mRNA	NA	coding protein	psRNATarget
NM_001159083.2	ncRNA:24   ACACGGUCCUAGUCAUUAAGUGCA   1   *||||||||||||||*|||||||| targets:1044   CGUGCCAGGAUCAGUUAUUCACGU   1067 Target Full Sequence	1.5	Zea mays oxidoreductase (LOC100286195), mRNA	NA	coding protein	psRNATarget
EU976070.1	ncRNA:24   ACACGGUCCUAGUCAUUAAGUGCA   1   *||||||||||||||*|||||||| targets:1045   CGUGCCAGGAUCAGUUAUUCACGU   1068 Target Full Sequence	1.5	Zea mays clone 510496 oxidoreductase mRNA, complete cds	NA	coding protein	psRNATarget
EU975850.1	ncRNA:24   ACACGGUCCUAGUCAUUAAGUGCA   1   *||||||||||||||*|||||||| targets:1235   CGUGCCAGGAUCAGUUAUUCACGU   1258 Target Full Sequence	1.5	Zea mays clone 503046 mRNA sequence	NA	coding protein	psRNATarget
EU940916.1	ncRNA:24   ACACGGUCCUAGUCAUUAAGUGCA   1   *||||||||||||||*|||||||| targets:366   CGUGCCAGGAUCAGUUAUUCACGU   389 Target Full Sequence	1.5	Zea mays clone 1212834 mRNA sequence	NA	coding protein	psRNATarget
EU940954.1	ncRNA:24   ACACGGUCCUAGUCAUUAAGUGCA   1   *||||||||||||||*|||||||| targets:1322   CGUGCCAGGAUCAGUUAUUCACGU   1345 Target Full Sequence	1.5	Zea mays clone 1220838 mRNA sequence	NA	coding protein	psRNATarget