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BaseInfo

ncRNA ID novel_zma_miR9021
Species Zea mays
Class miRNA
Genome position Chr6:38566669-38566779 [+]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 1 - UUUCGUCGGCCUGGAUGCGGCCGA - 24
Stem-loop(if miRNA) --            -  AU C           AUACGCCAC               UA
  UUUCGUCGGCCU GG  G GGCCGACGAAA         UUAUUUUCGUCGGCC  G
  |||||||||||| ||  | |||||||||||         |||||||||||||||  C
  AAAGCAGCCGGA CC  C CUGGCUGCUUU         GAUAAAAGCAGCCGG  U
UA            G  -- -           --GACACAC               CA
Stem-loop sequence UUUCGUCGGCCUGGAUGCGGCCGACGAAAAUACGCCACUUAUUUUCGUCGGCCUAGCUACGGCCGACGAAAAUAGCACACAGUUUCGUCGGUCCCCGAGGCCGACGAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020543196.1
ncRNA:24   AGCCGGCGUAGGUCCGGCUGCUUU   1
  ||||||*|||||||*|||||||||
targets:59   UCGGCCUCAUCCAGACCGACGAAA   82

2.5 PREDICTED: Zea mays transcriptional regulatory protein AlgP-like (LOC109941932), mRNA NA coding protein psRNATarget