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BaseInfo

ncRNA ID	novel_zma_miR9016
Species	Zea mays
Class	miRNA
Genome position	Chr6:83949458-83949596 [-]
Reference genome	RefGen_v4
Source	SRR4237222
Length	24
Mature sequence(if miRNA)	116 - AGGGCUGAUUUGGUGACUAGGGAU - 139
Stem-loop(if miRNA)	--       A                C   A                         -A          UU   AGGGCUG UUUGGUGACUAGGGAU ACG GGGAUCCAUGGGGGAGGAAUCCCUU  UUAUUCAAUU  G   ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||  ||||||||||   UCCCGAC AAACCACUGGUCCCUA UGC CCCUAGGUACCCCCUCCUUAGGGGA  GAUAAGUUGA  A GC       C                A   C                         AC          UA
Stem-loop sequence	AGGGCUGAUUUGGUGACUAGGGAUCACGAGGGAUCCAUGGGGGAGGAAUCCCUUAUUAUUCAAUUUUGAAUAGUUGAAUAGCAAGGGGAUUCCUCCCCCAUGGAUCCCCCGUAAUCCCUGGUCACCAAACCAGCCCUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235575.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||||| targets:61   AUCCCUGGUCACCAAAUCAGCCCU   84 Target Full Sequence	1.0	Sequence 1570 from Patent EP2985353	NA	coding protein	psRNATarget
HI403445.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||||| targets:61   AUCCCUGGUCACCAAAUCAGCCCU   84 Target Full Sequence	1.0	Sequence 1570 from Patent EP2074227	NA	coding protein	psRNATarget
JB163906.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||||| targets:61   AUCCCUGGUCACCAAAUCAGCCCU   84 Target Full Sequence	1.0	Sequence 1570 from Patent EP2559767	NA	coding protein	psRNATarget
HI403301.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||||| targets:96   AUCCCUGGUCACCAAAUCAGCCCU   119 Target Full Sequence	1.0	Sequence 1426 from Patent EP2074227	NA	coding protein	psRNATarget
JB163762.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||||| targets:96   AUCCCUGGUCACCAAAUCAGCCCU   119 Target Full Sequence	1.0	Sequence 1426 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235431.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||||| targets:96   AUCCCUGGUCACCAAAUCAGCCCU   119 Target Full Sequence	1.0	Sequence 1426 from Patent EP2985353	NA	coding protein	psRNATarget
HI403355.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:60   AUCCCUGGUCACCAAAUCAGCUCU   83 Target Full Sequence	2.5	Sequence 1480 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235485.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:60   AUCCCUGGUCACCAAAUCAGCUCU   83 Target Full Sequence	2.5	Sequence 1480 from Patent EP2985353	NA	coding protein	psRNATarget
JB163816.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:60   AUCCCUGGUCACCAAAUCAGCUCU   83 Target Full Sequence	2.5	Sequence 1480 from Patent EP2559767	NA	coding protein	psRNATarget
HI403402.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:95   AUCCCUGGUCACCAAAUCAGCUCU   118 Target Full Sequence	2.5	Sequence 1527 from Patent EP2074227	NA	coding protein	psRNATarget
JB163696.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:95   AUCCCUGGUCACCAAAUCAGCUCU   118 Target Full Sequence	2.5	Sequence 1360 from Patent EP2559767	NA	coding protein	psRNATarget
JB163863.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:95   AUCCCUGGUCACCAAAUCAGCUCU   118 Target Full Sequence	2.5	Sequence 1527 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235532.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:95   AUCCCUGGUCACCAAAUCAGCUCU   118 Target Full Sequence	2.5	Sequence 1527 from Patent EP2985353	NA	coding protein	psRNATarget
HI403235.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:95   AUCCCUGGUCACCAAAUCAGCUCU   118 Target Full Sequence	2.5	Sequence 1360 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235365.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||=|| targets:95   AUCCCUGGUCACCAAAUCAGCUCU   118 Target Full Sequence	2.5	Sequence 1360 from Patent EP2985353	NA	coding protein	psRNATarget
HI403275.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||=| targets:99   AUCCCUGGUCACCAAAUCAGCCUU   122 Target Full Sequence	2.5	Sequence 1400 from Patent EP2074227	NA	coding protein	psRNATarget
JB163736.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||=| targets:99   AUCCCUGGUCACCAAAUCAGCCUU   122 Target Full Sequence	2.5	Sequence 1400 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235405.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||=| targets:99   AUCCCUGGUCACCAAAUCAGCCUU   122 Target Full Sequence	2.5	Sequence 1400 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008675221.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=||||||||||||||||* targets:180   AUCCCUGGUCACCAAAUCAGCCCG   203 Target Full Sequence	2.0	PREDICTED: Zea mays gibberellin responsive 1 (gar1), transcript variant X2, mRNA	NA	coding protein	psRNATarget
LQ235420.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||*| targets:99   AUCCCUGGUCACCAAAUCAGCCGU   122 Target Full Sequence	2.5	Sequence 1415 from Patent EP2985353	NA	coding protein	psRNATarget
HI403290.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||*| targets:99   AUCCCUGGUCACCAAAUCAGCCGU   122 Target Full Sequence	2.5	Sequence 1415 from Patent EP2074227	NA	coding protein	psRNATarget
JB163751.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||*| targets:99   AUCCCUGGUCACCAAAUCAGCCGU   122 Target Full Sequence	2.5	Sequence 1415 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235479.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||*| targets:131   AUCCCUGGUCACCAAAUCAGCCAU   154 Target Full Sequence	2.5	Sequence 1474 from Patent EP2985353	NA	coding protein	psRNATarget
HI403349.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||*| targets:131   AUCCCUGGUCACCAAAUCAGCCAU   154 Target Full Sequence	2.5	Sequence 1474 from Patent EP2074227	NA	coding protein	psRNATarget
JB163810.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||||=|||||||||||||||*| targets:131   AUCCCUGGUCACCAAAUCAGCCAU   154 Target Full Sequence	2.5	Sequence 1474 from Patent EP2559767	NA	coding protein	psRNATarget
EU950017.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||*=||||||||||||||||| targets:512   AUCCCGGGUCACCAAAUCAGCCCU   535 Target Full Sequence	2.0	Zea mays clone 457681 mRNA sequence	NA	coding protein	psRNATarget
AY108273.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*||||||||||||=||| targets:454   AUCCCUAUUCACCAAAUCAGUCCU   477 Target Full Sequence	2.5	Zea mays PCO108913 mRNA sequence	NA	coding protein	psRNATarget
EU941266.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*|||=|||||||||||| targets:686   AUCCCUAAUCAUCAAAUCAGCCCU   709 Target Full Sequence	2.5	Zea mays clone 1435213 mRNA sequence	NA	coding protein	psRNATarget
BT068562.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*|||||||||=|||||| targets:1077   AUCCCUAAUCACCAAAUUAGCCCU   1100 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0331B04 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020540504.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||*=||||||||||||||||| targets:1877   AUCCCGGGUCACCAAAUCAGCCCU   1900 Target Full Sequence	2.0	PREDICTED: Zea mays nucleolar RNA helicase 2 (LOC100281387), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020540503.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||*=||||||||||||||||| targets:2315   AUCCCGGGUCACCAAAUCAGCCCU   2338 Target Full Sequence	2.0	PREDICTED: Zea mays nucleolar RNA helicase 2 (LOC100281387), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008671854.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||*=||||||||||||||||| targets:70   AUCCCCGGUCACCAAAUCAGCCCU   93 Target Full Sequence	2.0	PREDICTED: Zea mays alpha-glucosidase 2 (LOC103647311), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681394.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*||||||||||||=||| targets:4510   AUCCCUAAUCACCAAAUCAGUCCU   4533 Target Full Sequence	2.5	PREDICTED: Zea mays disease resistance protein RPM1-like (LOC103654547), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008681392.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*||||||||||||=||| targets:4684   AUCCCUAAUCACCAAAUCAGUCCU   4707 Target Full Sequence	2.5	PREDICTED: Zea mays disease resistance protein RPM1-like (LOC103654547), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020552825.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*||||||||||||=||| targets:4775   AUCCCUAAUCACCAAAUCAGUCCU   4798 Target Full Sequence	2.5	PREDICTED: Zea mays disease resistance protein RPM1-like (LOC103654547), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020545246.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*|||||||||||||||* targets:152   AUCCCUAAUCACCAAAUCAGCCCG   175 Target Full Sequence	2.0	PREDICTED: Zea mays methyl binding domain113 (cl26423_1), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008667438.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||*||=||||||||||||||=|| targets:3567   AUCGCUGGUCACCAAAUCAGCUCU   3590 Target Full Sequence	2.5	PREDICTED: Zea mays BRCA1 C Terminus domain containing protein expressed (LOC103644241), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI409663.1	ncRNA:24   UAGGG-AUCAGUGGUUUAGUCGGGA   1   |||||-|*||||||||||||||||| targets:97   AUCCCCUUGUCACCAAAUCAGCCCU   121 Target Full Sequence	3.0	Sequence 7788 from Patent EP2074227	NA	coding protein	psRNATarget
JB170124.1	ncRNA:24   UAGGG-AUCAGUGGUUUAGUCGGGA   1   |||||-|*||||||||||||||||| targets:97   AUCCCCUUGUCACCAAAUCAGCCCU   121 Target Full Sequence	3.0	Sequence 7788 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241793.1	ncRNA:24   UAGGG-AUCAGUGGUUUAGUCGGGA   1   |||||-|*||||||||||||||||| targets:97   AUCCCCUUGUCACCAAAUCAGCCCU   121 Target Full Sequence	3.0	Sequence 7788 from Patent EP2985353	NA	coding protein	psRNATarget
EU961132.1	ncRNA:24   UAGGG-AUCAGUGGUUUAGUCGGGA   1   |||||-|*||||||||||||||||| targets:851   AUCCCCUUGUCACCAAAUCAGCCCU   875 Target Full Sequence	3.0	Zea mays clone 232865 phospholipid hydroperoxide glutathione peroxidase mRNA, complete cds	NA	coding protein	psRNATarget
BT040716.2	ncRNA:24   UAGGG-AUCAGUGGUUUAGUCGGGA   1   |||||-|*||||||||||||||||| targets:890   AUCCCCUUGUCACCAAAUCAGCCCU   914 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0120F10 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147738.1	ncRNA:24   UAGGG-AUCAGUGGUUUAGUCGGGA   1   |||||-|*||||||||||||||||| targets:895   AUCCCCUUGUCACCAAAUCAGCCCU   919 Target Full Sequence	3.0	Zea mays putative glutathione peroxidase (LOC100273297), mRNA	NA	coding protein	psRNATarget
BT066291.1	ncRNA:24   UAGGG-AUCAGUGGUUUAGUCGGGA   1   |||||-|*||||||||||||||||| targets:895   AUCCCCUUGUCACCAAAUCAGCCCU   919 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0176M03 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539542.1	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||||-||*||||||||||||||||| targets:161   AUCCACUUGUCACCAAAUCAGCCCU   185 Target Full Sequence	1.0	PREDICTED: Zea mays ribonuclease P protein subunit p29-like (LOC103630287), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008651348.2	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||||-||*||||||||||||||||| targets:161   AUCCACUUGUCACCAAAUCAGCCCU   185 Target Full Sequence	1.0	PREDICTED: Zea mays ribonuclease P protein subunit p29-like (LOC103630287), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020539541.1	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||||-||*||||||||||||||||| targets:161   AUCCACUUGUCACCAAAUCAGCCCU   185 Target Full Sequence	1.0	PREDICTED: Zea mays ribonuclease P protein subunit p29-like (LOC103630287), transcript variant X6, mRNA	NA	coding protein	psRNATarget
EU945757.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|==||=|||||||||||||=||| targets:69   UUUUCUGGUCACCAAAUCAGUCCU   92 Target Full Sequence	2.5	Zea mays clone 284734 mRNA sequence	NA	coding protein	psRNATarget
LQ235077.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*||||||||||||||*| targets:114   AUCCCUAAUCACCAAAUCAGCCAU   137 Target Full Sequence	2.5	Sequence 1072 from Patent EP2985353	NA	coding protein	psRNATarget
JB163408.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*||||||||||||||*| targets:114   AUCCCUAAUCACCAAAUCAGCCAU   137 Target Full Sequence	2.5	Sequence 1072 from Patent EP2559767	NA	coding protein	psRNATarget
HI402947.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||*||||||||||||||*| targets:114   AUCCCUAAUCACCAAAUCAGCCAU   137 Target Full Sequence	2.5	Sequence 1072 from Patent EP2074227	NA	coding protein	psRNATarget
BT066676.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||**||||||||||||||| targets:1339   AUCCCUAACCACCAAAUCAGCCCU   1362 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0044C22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175907.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||||||**||||||||||||||| targets:1339   AUCCCUAACCACCAAAUCAGCCCU   1362 Target Full Sequence	2.0	Zea mays CCAAT-HAP2 transcription factor (CA2P12), mRNA	NA	coding protein	psRNATarget
EU974244.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||*|*=||||||||||||||||| targets:490   AUCACCGGUCACCAAAUCAGCCCU   513 Target Full Sequence	2.0	Zea mays clone 443590 SAUR1 - auxin-responsive SAUR family member mRNA, complete cds	NA	coding protein	psRNATarget
XM_008649119.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||*||||*|||||||||||||=|| targets:35   AUACCUAAUCACCAAAUCAGCUCU   58 Target Full Sequence	2.5	PREDICTED: Zea mays PHD transcription factor (PHD35), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT036026.1	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||=|-||=|||||||||*||||||| targets:1126   AUUCACUGGUCACCAAACCAGCCCU   1150 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0092G03 mRNA, complete cds	NA	coding protein	psRNATarget
EU970908.1	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||=|-||=|||||||||*||||||| targets:1184   AUUCACUGGUCACCAAACCAGCCCU   1208 Target Full Sequence	2.5	Zea mays clone 353773 COV1-like protein mRNA, complete cds	NA	coding protein	psRNATarget
BT035612.1	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||=|-||=|||||||||*||||||| targets:1226   AUUCACUGGUCACCAAACCAGCCCU   1250 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0071P21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138498.1	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||=|-||=|||||||||*||||||| targets:1226   AUUCACUGGUCACCAAACCAGCCCU   1250 Target Full Sequence	2.5	Zea mays COV1-like protein (LOC100193368), mRNA	NA	coding protein	psRNATarget
XM_020549479.1	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||=|-||=|||||||||*||||||| targets:1331   AUUCACUGGUCACCAAACCAGCCCU   1355 Target Full Sequence	2.5	PREDICTED: Zea mays COV1-like protein (LOC100193368), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT064402.1	ncRNA:24   UAGG-GAUCAGUGGUUUAGUCGGGA   1   ||=|-||=|||||||||*||||||| targets:1437   AUUCACUGGUCACCAAACCAGCCCU   1461 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0166C02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175341.1	ncRNA:24   UA--GGGAUCAGUGGUUUAGUCGGGA   1   ||--=|||*||||||||||||||=|| targets:2175   AUAAUCCUCGUCACCAAAUCAGCUCU   2200 Target Full Sequence	2.5	Zea mays uncharacterized LOC100382616 (LOC100382616), mRNA	NA	coding protein	psRNATarget
BT064897.1	ncRNA:24   UA--GGGAUCAGUGGUUUAGUCGGGA   1   ||--=|||*||||||||||||||=|| targets:2175   AUAAUCCUCGUCACCAAAUCAGCUCU   2200 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0348A19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008665597.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:1644   UUCCCUUGUCACCAAACCAGCCCU   1667 Target Full Sequence	2.5	PREDICTED: Zea mays zn-finger, RanBP-type, containing protein (LOC100272869), transcript variant X11, mRNA	NA	coding protein	psRNATarget
XM_008665604.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:1645   UUCCCUUGUCACCAAACCAGCCCU   1668 Target Full Sequence	2.5	PREDICTED: Zea mays zn-finger, RanBP-type, containing protein (LOC100272869), transcript variant X13, mRNA	NA	coding protein	psRNATarget
XM_020547627.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:1669   UUCCCUUGUCACCAAACCAGCCCU   1692 Target Full Sequence	2.5	PREDICTED: Zea mays zn-finger, RanBP-type, containing protein (LOC100272869), transcript variant X12, mRNA	NA	coding protein	psRNATarget
XM_008665556.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:1800   UUCCCUUGUCACCAAACCAGCCCU   1823 Target Full Sequence	2.5	PREDICTED: Zea mays zn-finger, RanBP-type, containing protein (LOC100272869), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008665550.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:1827   UUCCCUUGUCACCAAACCAGCCCU   1850 Target Full Sequence	2.5	PREDICTED: Zea mays zn-finger, RanBP-type, containing protein (LOC100272869), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008665541.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:1831   UUCCCUUGUCACCAAACCAGCCCU   1854 Target Full Sequence	2.5	PREDICTED: Zea mays zn-finger, RanBP-type, containing protein (LOC100272869), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008665546.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:1807   UUCCCUUGUCACCAAACCAGCCCU   1830 Target Full Sequence	2.5	PREDICTED: Zea mays zn-finger, RanBP-type, containing protein (LOC100272869), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008665533.2	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:1798   UUCCCUUGUCACCAAACCAGCCCU   1821 Target Full Sequence	2.5	PREDICTED: Zea mays zn-finger, RanBP-type, containing protein (LOC100272869), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT067203.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   *|||||*|||||||||*||||||| targets:2282   UUCCCUUGUCACCAAACCAGCCCU   2305 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0285M10 mRNA, complete cds	NA	coding protein	psRNATarget
AF244696.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   |||*-||||||||||||||||=|| targets:864   AUCA-UAGUCACCAAAUCAGCUCU   886 Target Full Sequence	1.5	Zea mays glutathione S-transferase GST 31 mRNA, complete cds	NA	coding protein	psRNATarget
EU956986.1	ncRNA:24   UAGGGAUCAGUGGUUUAGUCGGGA   1   ||||-|*||||||||||||||=|| targets:2305   AUCC-UCGUCACCAAAUCAGCUCU   2327 Target Full Sequence	2.5	Zea mays clone 1579656 mRNA sequence	NA	coding protein	psRNATarget
DQ244411.1	ncRNA:24   UAGG-----GAUCAGUGGUUUAGUCGGGA   1   *|=|-----||=||||||||||||||||* targets:716   CUUCAAAGGCUGGUCACCAAAUCAGCCCA   744 Target Full Sequence	2.0	Zea mays clone 7242 mRNA sequence	NA	coding protein	psRNATarget