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BaseInfo

ncRNA ID novel_zma_miR9011
Species Zea mays
Class miRNA
Genome position Chr6:156643355-156643451 [-]
Reference genome RefGen_v4
Source SRR4237222
Length 24
Mature sequence(if miRNA) 74 - CGGCUUGAGCUCGGAGCGGCUCGC - 97
Stem-loop(if miRNA) --                CG  UCGCGA     G       -   --   GA
  CGGCUUGAGCUCGGAG  GC      GCCUC AGCGAGC CGA  ACC  G
  ||||||||||||||||  ||      ||||| ||||||| |||  |||
  GCCGAACUCGAGCCUC  CG      CGGAG UUGCUCG GCU  UGG  C
GA                AA  ---CAA     -       A   UU   AC
Stem-loop sequence CGGCUUGAGCUCGGAGCGGCUCGCGAGCCUCGAGCGAGCCGAACCGAGCCAGGUUUUCGAGCUCGUUGAGGCAACGCAACUCCGAGCUCAAGCCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU948448.1
ncRNA:24   CGCUCGGCGAGGCUCGAGUUCGGC   1
  *|||||||||||||||||=|||||
targets:312   CCGAGCCGCUCCGAGCUCGAGCCG   335

1.5 Zea mays clone 376771 mRNA sequence NA coding protein psRNATarget
XM_008680397.2
ncRNA:24   CGCUCGGCGAGGCUCGAGUUCGGC   1
  ||||**||||||||||||||||=|
targets:1176   GCGAUGCGCUCCGAGCUCAAGCUG   1199

2.5 PREDICTED: Zea mays exocyst complex component EXO70A1 (LOC103653505), mRNA NA coding protein psRNATarget