ncRNA ID | novel_zma_miR9010 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:158668504-158668604 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237222 |
Length | 22 |
Mature sequence(if miRNA) | 80 - GCACCAUCGGACUGUCUGGUGG - 101 |
Stem-loop(if miRNA) |
--     AUC G           -------------      G   A     C  AAA   GCACC   G ACUGUCUGGUG             GCCCAG CUG UAGGG UC   C   |||||   | |||||||||||             |||||| ||| ||||| ||   CGUGG   U UGACAGACCAC             UGGGUU GAC AUCCC AG   G CG     -CC G           GUGAUCGGUGCAG      -   A     A  CUG |
Stem-loop sequence | GCACCAUCGGACUGUCUGGUGGCCCAGGCUGAUAGGGCUCAAACGGUCGAACCCUAACAGUUGGGUGACGUGGCUAGUGCACCAGACAGUGUCCGGUGCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001175661.1 |
|
2.5 | Zea mays uncharacterized LOC100382977 (LOC100382977), mRNA | NA | coding protein | psRNATarget | |||||||||
BT065862.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0155J05 mRNA, complete cds | NA | coding protein | psRNATarget |