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BaseInfo

ncRNA ID osa-miRf10498-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CACGGUUACCACGGUUACCGCG - NA
Stem-loop(if miRNA)           U    GC   U       -UU   ----------AC C --        GGGUACGGUAAUAUAAAUACCGCGGUAAC
ACCGCGCGGU ACCG  GGU ACCGUGG   ACC            G U  UACCGCGG                             C
|||||||||| ||||  ||| |||||||   |||            | |  ||||||||                             U
UGGCGCGCCA UGGC  CCA UGGCACU   UGG            A G  UUUAAGUU                             U
          U    -A   U       UUU   CACGUUUUAAAU - UU        UAAUAAAAAAUUUAAAUAAACUUAAACUC
Stem-loop sequence ACCGCGCGGUUACCGGCGGUUACCGUGGUUACCACGCUUACCGCGGGGGUACGGUAAUAUAAAUACCGCGGUAACCUUCUCAAAUUCAAAUAAAUUUAAAAAAUAAUUUGAAUUUUUGAUAAAUUUUGCACGGUUUUUCACGGUUACCACGGUUACCGCGCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK103229.1
ncRNA:22   GCGCCAUUGGCACCAUUGGCAC   1
  |*||||||||||||||||||*|
targets:1352   CCCGGUAACCGUGGUAACCGCG   1373

1.5 Oryza sativa Japonica Group cDNA clone:J033123D06, full insert sequence NA coding protein psRNATarget