ncRNA ID | novel_zma_miR9003 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:102481617-102481799 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237222 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACUUCCUAGAGGAGACUGUAGGA - 24 |
Stem-loop(if miRNA) |
--             -  A                  UG              GA   AG -CG            -------G      UUGA    A   AACUUCCUAGAGG AG CUGUAGGAAGUUAGCAUG  CAGUUAACUUCCUA  GGC  C   UAGGAAGUUAGU        GCUCGU    CCGC C   ||||||||||||| || ||||||||||||||||||  ||||||||||||||  |||  |   ||||||||||||        ||||||    ||||   UUGAAGGAUCUCC UC GGCAUCCUUCAAUCGUAC  GUCGAUUGAAGGAU  CCG  G   AUCCUUCAAUCG        CGAGUA    GGCG C GA             G  -                  GU              -G   GA UAG            AAAGUCAA      ----    C |
Stem-loop sequence | AACUUCCUAGAGGAGACUGUAGGAAGUUAGCAUGUGCAGUUAACUUCCUAGAGGCAGCCGUAGGAAGUUAGUGGCUCGUUUGACCGCACCCGCGGAUGAGCAACUGAAAGCUAACUUCCUAGAUGAGGCCGUAGGAAGUUAGCUGUGCAUGCUAACUUCCUACGGCUGCCUCUAGGAAGUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT086229.2 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds | NA | coding protein | psRNATarget |