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BaseInfo

ncRNA ID	novel_zma_miR8999
Species	Zea mays
Class	miRNA
Genome position	Chr5:89562063-89562128 [+]
Reference genome	RefGen_v4
Source	SRR4237222
Length	23
Mature sequence(if miRNA)	1 - GGACCACUUCGUUUGUACGACUG - 23
Stem-loop(if miRNA)	--        -   UUU   -     -- -G    G   GGACCACU UCG   GUA CGACU  G  GCCG U   |||||||| |||   ||| |||||  |  ||||   CCUGGUGA GGC   CGU GUUGG  C  CGGU G UC        U   -UU   A     UG AG    A
Stem-loop sequence	GGACCACUUCGUUUGUACGACUGGGCCGGUGAUGGCGACGUGGUUGAUGCUUCGGUAGUGGUCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU952163.1	ncRNA:23   GUCAGCAUGUUUGCUUCACCAGG   1   ||||*||||||||*||||||||| targets:1387   CAGUGGUACAAACAAAGUGGUCC   1409 Target Full Sequence	2.5	Zea mays clone 1213939 mRNA sequence	NA	coding protein	psRNATarget
EZ054699.1	ncRNA:23   GUCAGCAUGUUUGCUUCACCAGG   1   |||*|||*||||*|||||||||| targets:22   CAGCCGUUCAAAGGAAGUGGUCC   44 Target Full Sequence	2.5	TSA: Zea mays contig55821, mRNA sequence	NA	coding protein	psRNATarget
EZ050779.1	ncRNA:23   GUCAGCAUGUUUGCUUCACCAGG   1   =||*|||*||||*|||||||||| targets:44   UAGCCGUUCAAAGGAAGUGGUCC   66 Target Full Sequence	2.5	TSA: Zea mays contig51899, mRNA sequence	NA	coding protein	psRNATarget
AY104481.1	ncRNA:23   GUCAGCAUGUUUGCUUCACCAGG   1   =||*|||*||||*|||||||||| targets:79   UAGCCGUUCAAAGGAAGUGGUCC   101 Target Full Sequence	2.5	Zea mays PCO077711 mRNA sequence	NA	coding protein	psRNATarget
EU944994.1	ncRNA:23   GUCAGCAUGUUUGCUUCACCAGG   1   =||*|||*||||*|||||||||| targets:66   UAGCCGUUCAAAGGAAGUGGUCC   88 Target Full Sequence	2.5	Zea mays clone 237339 mRNA sequence	NA	coding protein	psRNATarget
EU960931.1	ncRNA:23   GUCAGCAUGUUUGCUUCACCAGG   1   =||*|||*||||*|||||||||| targets:990   UAGCCGUUCAAAGGAAGUGGUCC   1012 Target Full Sequence	2.5	Zea mays clone 229652 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137835.1	ncRNA:23   GUCAGCAUGUUUGCUUCACCAGG   1   =||*|||*||||*|||||||||| targets:1036   UAGCCGUUCAAAGGAAGUGGUCC   1058 Target Full Sequence	2.5	Zea mays putative cytochrome P450 superfamily protein (LOC100192620), mRNA	NA	coding protein	psRNATarget
BT034648.1	ncRNA:23   GUCAGCAUGUUUGCUUCACCAGG   1   =||*|||*||||*|||||||||| targets:1036   UAGCCGUUCAAAGGAAGUGGUCC   1058 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0006E22 mRNA, complete cds	NA	coding protein	psRNATarget